Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0094 ATGTCTAAGCAAAGGTTGGAAGGCAAGGTTGCAATTGTGACCGGGGGAGCAAGTGGAATAGGAGCAGAAGCAGCGAWRTTATTTGTGGAAAAYGGTGCAYTTGTHGTTATADCAGATGTTAACGATGAATTRGGGCTTCAAGTTGCAAGTTCCATTGGCGTAGAMAAGGTGAGTTACCATCACTGCGACGTTAGAGACGAGAAACAAGTTGAAGAAACCGTTGCTTTCGCTATCAAGAAATATGGAAGCCTAGATATCATGTTCAGTAACGCTGGAATTGCAGGCTCTTTCTATAACATACTTGATTTGGATTTGAATGACTTTGATAATACAATAGCTGTGAATGTTCGTGGAGCAGCGGCGTGTATTAAACACGCGGCACGTGTCATGGTGGAACGAAAGACACGTGGCTCCATAATTTGCACTGCTAGTACAGCTTCTGTGGTTGCACTTTGTGGCGATTCAGCTCCTTATGGTTATAACACATCCAAACATAGTCTTTTGGGTCTTGTGCGTTCGGCGTGTGGTGAGCTTGGAGCTTATGGGATTAGGGTCAATTCGATTTCACCTTCTTACGTGGCCACACCTTTGGCATGTGAAGCTCTTGGTATGGAAGCAAGCGAAGTTGAAAGTGCTGTTGTTGCCGGTGCCAATTTGCAGGGGATTGTGTTGAAGCCAATTCATGTTGCACAAACGGCTTTGTTTCTTGCTTCTGATGAATCTGCTTATATTAGTGGACACAATTTGGTCGTTGACGGAGGTTTGTTAGCCGTTAATAGCCCTGTTTCAAAAAAGTAA 798 0.4361 MSKQRLEGKVAIVTGGASGIGAEAAXLFVENGAXVVIXDVNDELGLQVASSIGVXKVSYHHCDVRDEKQVEETVAFAIKKYGSLDIMFSNAGIAGSFYNILDLDLNDFDNTIAVNVRGAAACIKHAARVMVERKTRGSIICTASTASVVALCGDSAPYGYNTSKHSLLGLVRSACGELGAYGIRVNSISPSYVATPLACEALGMEASEVESAVVAGANLQGIVLKPIHVAQTALFLASDESAYISGHNLVVDGGLLAVNSPVSKK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0094 265 Gene3D - 1 262 - -
Amo06g0094 265 PANTHER OXIDOREDUCTASE-RELATED 1 262 - -
Amo06g0094 265 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 262 - -
Amo06g0094 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Amo06g0094 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 IPR002347 -
Amo06g0094 265 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Amo06g0094 265 Pfam Enoyl-(Acyl carrier protein) reductase 15 255 - -
Amo06g0094 265 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Amo06g0094 265 PRINTS Glucose/ribitol dehydrogenase family signature 160 179 IPR002347 -
Amo06g0094 265 PRINTS Glucose/ribitol dehydrogenase family signature 219 239 IPR002347 -
Amo06g0094 265 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Amo06g0094 265 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Amo06g0094 265 PRINTS Glucose/ribitol dehydrogenase family signature 181 198 IPR002347 -
Amo06g0094 265 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 257 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0094 Amo-Chr6 988054 989199 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g0094 6 262 Acyl Lipid Metabolism Gene Families AT3G55290 28.727 1.12e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0094 - - gmx:100798299 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0601 16 9654676 9655854 Amo06g0094 06 988054 989199 hybridization