Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2531 ATGGGGGCTTCTGAAAACAATTTCCTCCACGTCATTGCCAAGAACTTCGACGTTCTTGCACTGCCCTTAGTTACCCTCGTTTACCCTTTATATGCTTCAATCCAGGCCATAGAGACCAGGTCAATTGCTGATGACCAACAATGGCTCACATATTGGGTTCTCTATTCTTTGATAACACTCTTTGAGCTCACTTTTGCCAAAGTTCTTGAAGTGCTTGCCATATGGCCCTATGCCAAGTTGATACTTAGTTGCTGGTTGGTTCTTCCACACTTTAATGGCGCAGCGCATGTTTATAAGCAATACATTAGACCTTTCTATATGAACCCACAACTTCCGCACCTGCCGCAGATGCCACGAACTTCTCACATGTGGTATGTTCCAAGAAAGAACATATTCAGCAAGCAAGACGATGTTTTGACCGCGGCTGAGAGATACATGGAAGAGCATGGAACAGAAGCCTTTGAAAGACTCATAAGCAGGGATAGAGAAGCTAGAGCAAGGCATCATGGAGCATACACAAATGGAAATTACACAATCTTCAATGATGATTTTATATATTAG 561 0.4296 MGASENNFLHVIAKNFDVLALPLVTLVYPLYASIQAIETRSIADDQQWLTYWVLYSLITLFELTFAKVLEVLAIWPYAKLILSCWLVLPHFNGAAHVYKQYIRPFYMNPQLPHLPQMPRTSHMWYVPRKNIFSKQDDVLTAAERYMEEHGTEAFERLISRDREARARHHGAYTNGNYTIFNDDFIY* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2531 186 PANTHER HVA22-LIKE PROTEIN 2 185 - -
Amo05g2531 186 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
Amo05g2531 186 PANTHER HVA22-LIKE PROTEINS 2 185 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2531 Amo-Chr5 56044794 56047879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2531 K17279 - gmx:100775940 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2531 05 56044794 56047879 Amo15g0425 15 19914653 19916864 hybridization
Amo05g2531 05 56044794 56047879 Amo01g4219 01 117843791 117846881 PCT