Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g4219 ATGGGATCTGGAGCTGGAAACTTCATCAAAGTCATTCTCAAGAACTTTGATGTTCTTGCTGGGCCGGTGATTAGTCTTGTTTATCCTCTGTATGCTTCAGTTAGGGCAATTGAGAGCAAGTCACCTGTGGATGATCAGCAGTGGCTCACTTACTGGGTTCTYTATTCCATGATCACTCTCTTTGAACTCACCTTCGCCAAACTTCTTGAATGGATTCCTATATGGCCCTATGCTAAGCTGATTATAACCTGCTGGTTGGTCCTTCCATACTTTAGTGGTGCTGCTTATGTTTACGAGCATTATGTGAGACCTTTCTTTGTTAATCCTCAGACAGTTAACATYTGGTATGTTCCAAGTAAAAAGGACAAATTGGGTAAGAAAGAGGACATTCTAACTGCTGCCGAGAAGTACATCCAAGAGAATGGAACACAAGAATTTGAGAATCTCATCCATAGGGCTGATAAATCAAGAAGCGATGGTGGTTATTACTCAATGTACCACGATGAGACCTATTGA 516 0.4147 MGSGAGNFIKVILKNFDVLAGPVISLVYPLYASVRAIESKSPVDDQQWLTYWVLYSMITLFELTFAKLLEWIPIWPYAKLIITCWLVLPYFSGAAYVYEHYVRPFFVNPQTVNIWYVPSKKDKLGKKEDILTAAEKYIQENGTQEFENLIHRADKSRSDGGYYSMYHDETY* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g4219 171 PANTHER HVA22-LIKE PROTEIN 4 161 - -
Amo01g4219 171 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
Amo01g4219 171 PANTHER HVA22-LIKE PROTEINS 4 161 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g4219 Amo-Chr1 117843791 117846881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g4219 K17279 - gmx:100808701 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2531 05 56044794 56047879 Amo01g4219 01 117843791 117846881 PCT
Amo15g0425 15 19914653 19916864 Amo01g4219 01 117843791 117846881 PCT