Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g2357 ATGGCCTCTGAGAGGGAAAGTTTTGACCTCTCTGGACCCTTATATCTAACGCATGTTGACTGGGATAATCCGAATCATCGAAAGTCAGTTGCTGCTAGTTTGGTCCAAGGTGTTTATGTGCTAGAAAAGGATAGACAAGATCGACGCGAAGGGACAGATGCTCTAGCATCGCCTTGGTGGGTTTTCTTCAACTTTCAGTTACTCCACAAACTTGTGGATGATGTTGATTCCTCTATTTTTGGTGCAATCTATGAGTTCAAGCCTCCATCAACTTACTGCAATGTCACTCTTCATAGAAGTCCACACTATGTCATTGCCTTCAGGGGAACCATAACGAAGGCAGACTCAGTTTCGCGTGATATTGAGCTGGATATGCATTTTGTGCGAAATGGTCTTCATCAAACTTCGCGCTATGAAATAGCTATCCAAGCTGTTCGAAACATGATAGCTACTGTTGGTGATTCAGGTATCTGGTTGGCTGGTCACTCTTTAGGATCGGCAGTGTCATTGCTTTGTGGGAAAACCATGGCCAAGAGTGGGAATTTCATTGAATCATTTCTTTTCAACCCTCCATATGTGTCTGCTCCAATTGAGAGAATAAAGGATAAGAAAGTGAAGCATGGGCTTAGAATTGCTGGCAGTGTGATAACAGCTGGACTCACCCTTGCTGTGAAAGCTAAGCAGAAGAAGAGTTTGTCATCTGATCCTTTTGCTGCTTTCTCTGCTTGGGTTCCATGCTTGTTTGTGAATCCATCAGATCATATATGCTCTGAGTATATTGGATACTTTGAACATAGAAAAAAAATGGAGGAGATTGGTGCAGGGAGCATTGAGAGGTTAGCCACACAAAACTCCCTTGGGTGTCTGCTGATGGGTGCATTTGGGAAGGAATCTGAACCACTGCACCTCATTCCTTCTGCTTCTGTTACAGTGAATTTGACTCCTTCAAGAGATTTCAAAGATGCTCATGGGATTCACCAGTGGTGGAAACCTCACTTGCACCTTCAATCCAAACTCTACAAATACTAA 1029 0.4334 MASERESFDLSGPLYLTHVDWDNPNHRKSVAASLVQGVYVLEKDRQDRREGTDALASPWWVFFNFQLLHKLVDDVDSSIFGAIYEFKPPSTYCNVTLHRSPHYVIAFRGTITKADSVSRDIELDMHFVRNGLHQTSRYEIAIQAVRNMIATVGDSGIWLAGHSLGSAVSLLCGKTMAKSGNFIESFLFNPPYVSAPIERIKDKKVKHGLRIAGSVITAGLTLAVKAKQKKSLSSDPFAAFSAWVPCLFVNPSDHICSEYIGYFEHRKKMEEIGAGSIERLATQNSLGCLLMGAFGKESEPLHLIPSASVTVNLTPSRDFKDAHGIHQWWKPHLHLQSKLYKY* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g2357 342 SUPERFAMILY alpha/beta-Hydrolases 56 197 IPR029058 -
Amo05g2357 342 PANTHER LIPASE CLASS 3-LIKE 2 342 - -
Amo05g2357 342 Gene3D alpha/beta hydrolase 60 207 IPR029058 -
Amo05g2357 342 Pfam Lipase (class 3) 132 181 IPR002921 GO:0006629
Amo05g2357 342 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g2357 Amo-Chr5 50204910 50206996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g2357 1 276 Acyl Lipid Metabolism Gene Families AT2G05260 59.441 2.93e-122 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g2357 - - gmx:100786952 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2357 05 50204910 50206996 Amo13g3264 13 103744190 103744600 PCT
Amo05g2357 05 50204910 50206996 Amo03g2270 03 93813320 93816003 PCT