Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2799 ATGTTGCCGATCATATGCTTTAGAGATGGAAGTCCTCCACTGCCAGATGCCTTAAACATATCAATGACGAATTCAGCAATCTCAGGGATAAATGGTCTTGATGTAGAGCAGTGTTTTCCAATGCAGAAAAATATCACTATGACATTGACAAACAATCAGATATCTCCAGGTGTTTGGTACATTGGCCTTTTCAATGGCATTGGACCTACAAGGACACAGTCAAAGATGATTATCCGAGGTCCGGCATACTCCTTCATTGCTAATATCAGCGTGGAAGCATGCGCAAATTCAATGATGAGGGGGAATTTCTGTAACAGTACAGTATATCCACTCTCATGCACATCTTCCGGTAACTATAATGCTTTGGCGGTTATGGCGAACACGGCAGTAATGGAGAATGTTGTGACCTGCAGGAGTAGTTTTAAAATGTTTTGTGGTCATGAAGGTGTACCAAACTTCTTCTCCTTGGATATAATGAATGTGGCAGAAGAACTTACCTTTACAGTTAAAGATGTCAGATTCAACACTACCTCTTTGAATAGCAGTTCTGCTGCAAATGATGTTCATTTAATGTGTTTTATTCGACACGGTGCAATGCCTTCGGCAACTTTGTATGATTATACCAGTGATTTAAATAAAGTTCCATTGGTTATACATTCTCCACTAATTGGTCGTTGGTACATTAGTATAGTACCTGTCAATCTTACGACAACTCGGGACAGCAATGCTGGAGTTTGCTATTCAATGGTGTCGCATCTGCTTCAATGCCCTTTTGGGAAAGGTGGGCCAAATTGTACAATGAATAGCTACATGCTCCAGACATTTGTAAGGAGAGGTCCAACCCCGTTTGAATCGTACTACTTACCGGTCAGTGGCGGAGCATCACATGATTCGGCAAACTTTCCTCTCGAGCCACTTTTAAGCAACTCATCATACAATGGACAACCAGATAACATTTGGACTTTCTTTCTTTTGGACATACCTCGCGGTGGAGCCGGAGGAAATATTCATGTTCAGCTTTCCTCGGATGTCAAGATCAATTATGAAATATATGCTCGATTTGGTGGATTGCCGTCGCTTGTTAGCTGGGATTATTATTATGTGAACAAGACAAGGAGAAGTGATCCATCCATGTTTTTCAAGCTCTATGATTCAAGGGATGACAAGGCTGATTTTTATATTATGTATGCTAGAGAAGGAACTTGGGGATTTGGTCTAAGACATGTTAATACCAGCAATGATTCTTTAAAGGGGCCAACTATCATGTCAATTGCGCTTGAACGGTGCCCAAAACGTTGTTCCTCCCACGGCGAATGTAAATTTTCTTTCGATGCTAGCGGATTGACATCATACAGCTTCTGCTCTTGTGATCGAAACCATGGAGGCTTTGACTGTAGCATTGAAATTGTAACTCATCAAGGACATGTTCGACAATCAATTTTTCTCATTGTATCGAATGCTGCAGCCATACTTCCTGCCTATTGGGCCCTTAGGAAGAAGGCATTAGCAGAATGGGTTTTATTCACATCCAGTGGAATTTCAAGTGGACTATATCATGCATGTGATGTTGGTACCTGGTGTGCATTAAGCTATAATGTCCTACAGTTCATGGACTTTTGGCTCTCCTTCATGGCTGTGATTAGCACTTTTCTTTATCTTGCTACCATTGATGAAGTATTTAAGAGAGCAATCCACACAGTTATTGCTATCCTTACAGCCCTATTGGCAGCAACAAAAGCAACCAGGTCTTCCAATATTCTTCTTGTTATTGTGATTGGTGCTCTTGGTCTTCTTATTGGATGGTTGATAGAGATCTCAACAAAATATAGATCCCTTTCAATTCCAGTTAGATTCCCATTGAATTTACATCTCAGTTTTCAAACAATAAAGACATGGATCATTAGTCTTGTCAGGACACTTCTGAGACGGTACAATTTGGCGTATGCTATGGCCGGTTTTGCTGCATTGGCCATGGCAGCAGTAAGCTGGACACTCGAAACTAGTGAAAACTACTGGTTCTGGCATAGCTTTTGGCATATTACAATATATACATCTTCTTTCTTCTTCCTTTGTTCAAAGGCAAATATTGAGAATCATCTACCAGCAAATGGAAACTATGAACTGACTCATCAGAATTCGCTTCCAAGAAGTGGTTAG 2157 0.407 MLPIICFRDGSPPLPDALNISMTNSAISGINGLDVEQCFPMQKNITMTLTNNQISPGVWYIGLFNGIGPTRTQSKMIIRGPAYSFIANISVEACANSMMRGNFCNSTVYPLSCTSSGNYNALAVMANTAVMENVVTCRSSFKMFCGHEGVPNFFSLDIMNVAEELTFTVKDVRFNTTSLNSSSAANDVHLMCFIRHGAMPSATLYDYTSDLNKVPLVIHSPLIGRWYISIVPVNLTTTRDSNAGVCYSMVSHLLQCPFGKGGPNCTMNSYMLQTFVRRGPTPFESYYLPVSGGASHDSANFPLEPLLSNSSYNGQPDNIWTFFLLDIPRGGAGGNIHVQLSSDVKINYEIYARFGGLPSLVSWDYYYVNKTRRSDPSMFFKLYDSRDDKADFYIMYAREGTWGFGLRHVNTSNDSLKGPTIMSIALERCPKRCSSHGECKFSFDASGLTSYSFCSCDRNHGGFDCSIEIVTHQGHVRQSIFLIVSNAAAILPAYWALRKKALAEWVLFTSSGISSGLYHACDVGTWCALSYNVLQFMDFWLSFMAVISTFLYLATIDEVFKRAIHTVIAILTALLAATKATRSSNILLVIVIGALGLLIGWLIEISTKYRSLSIPVRFPLNLHLSFQTIKTWIISLVRTLLRRYNLAYAMAGFAALAMAAVSWTLETSENYWFWHSFWHITIYTSSFFFLCSKANIENHLPANGNYELTHQNSLPRSG* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2799 718 ProSitePatterns EGF-like domain signature 1. 454 465 IPR000742 -
Amo04g2799 718 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 2 717 IPR021910 GO:0016021
Amo04g2799 718 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 2 717 - -
Amo04g2799 718 Pfam Protein of unknown function (DUF3522) 475 680 IPR021910 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2799 Amo-Chr4 102148755 102155014 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2799 - - gmx:100778959 1166.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g2799 04 102148755 102155014 Amo02g0398 02 4912969 4919474 PCT
Amo02g0398 02 4912969 4919474 Amo04g2799 04 102148755 102155014 PCT