Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0398 ATGTCTTTCAATTCGATTCTGTGGTGTCATCCAAAACTGATTCTTCTCACTGTTTTGTTACTGTTTGGTTCTTCTCTCTGCACTTCTGTAAGTGAAGGTGAACTTGTTGGAACAACGGTTTCTGGTGGCAACTTCTTCACCGTTTCCAGCTTCAGCTACCCTGAGACGACTATCAAGCCCTTTGATTTGCGCTATATCCGAGTTGATATACCGCCATCGTTTTCTGCTGTGTCCATAGCATTGAATTCAGATGTAGATCTTGATCTTTCAAGGGTCGATCGAATTCCAAAAAGCTCACTGCCAATAATATGTTTCAGAGATGGCAGCCCTCCTCTGCCAGATGCCTTAAACACAACTCTGAAAGATTCAGTTGTCTCAGGAATAAATGATCTTGATGTGGAGCAGTGTTTTCCTATGCAGAAGAATATCACTATGAGATTGACAAATGAACAGATATCTGCAGGCGCTTGGTACATTGGTCTATTCAATGGCATTGGAGCGACAAGAACACAATCAAAGATGATTAACCGAGGCTCATCATACTCCTTCATTGCTAATATAAGTGTGGAAGCATGCACGAATTCGATGATGAAGGGGGTGTTCTGTAACAGTACAGTCTATCCACTTTCATGCACATCGTCCAATGTCTTTAAATATTATGATTTGGATGCTACAGAGGTGAAGAAGCCGATGATGGAAAATGCTCTGACCTGCAAAAATAACTTCGAAACTTCGTGTGTTCAGGAAGGCGTACCACAGTTCTATTCCTTGGATATAACAAATATGGCAGAAGAATTGACCATTACAGCAGCAAATGTCAAATTCAACTCTACATCTTCAAATAGCACTTCTAGTGCAGATGATTTTAAGTTAATGTGTTATGCTCGCCATGGTGCAATTCCTTCAGAGACTTCGCATGATTATTCCAGTGATTTGAGTAAATCCCCTCTTGTTATTCGTGCTCCACAGATTGGTCGTCTATACATTAGTATATTACCGGTTAATCTGGCAAAAACGTTAGATGGAACTCAGGATGGCAATGCCAAAGTTTGCTATTCAATGGAAACACAAGTGGTTCAGTGCCCTCTTGGTAAAGCTGGACCGAATTGCACAATGGATAGCTATACACTTCAGACAGTCCTAAGTAGAATTCCAATGCCGTTCGAATCATATTATTTACCAGTTGGTGAGGTAGAAATGGCAGAGTCGGCAAATTTTCCTCTTGAGCCACTTTCAAACAACACAATGAACCAAGGAGAAACTGATAACATTTGGACTTACTTTATTTTGGACATTCCTCGTGGTGCAGCTGGACGAAATATTCATGTACGGCTATCCTCAGATGTGAAGATTAATTATGAATTTTATGCTCGATTTGGTGGATTACCTTCTCTTGAGAGTTGGGACTATTATTATGCTAACAAGACAAGGAAGAGCGACGAATCGGCGTTTTTCATGCTATATAGTTCAAAAGATGACAATGTTGATTTTTACATTATTTATGCTAGAGAAGGAACATGGGGTTTTGGTTTAAGACATCTTAATGCAAGCGGCAATTCTTTGAAAGCACAAACTGCCATGTCTATTTCACTTGAAGGATGCCCGAAACATTGCTCGTCTCATGGTGACTGTAGATATTCTTTTGATGCTAGCGGATTGACATCGTATAGCTTCTGCTCTTGTGATCGGAACCACGGGGGCTTTGACTGTAGCGTTGAAATTGTATCGCATAAAGGGCACATAGTGCAATCGATTTTTCTCATTGCATCGAATGCAGCAGCAATGCTTCCTGCCTATTGGGCCCTTCGGCAGAAGGCATACGCAGAATGGATTTTGTTCACTTCGAGTGGAATTTCGAGTGCGATTTATCATGCATGTGATGTAGGCACTTGGTGTCCCTTGACCTATAATGTTCTTCAGTTCATGGACTTTTGGCTTTCTTTCATGGCCGTGGTTAGCACTTTCGTGTACTTAGCCTCGATCAATGAAACACATAAGAGGGCAATCCACACAGCTGTTGCTATCTTTACTGCACTCATGGCTGCAACCAAGGCAACCAGATCTTCGAATATTGTTCTTGTGTTTGTGCTTGGAGCTATTGGTCTTCTAATCGGTTGGTTGATAGAGGTCTCATCAAAGTATAGGTCCCTTTCATTTTCATTCAGATTCTCACCAAGTTTCCCTCAAAGCTTGTTAACTATAAAGGATTGGCTCTATAAGCTTGTCATGTCGCTTTGGAGGCGGTTCCATTGGGGTTTTGCATTGGCCGGTTTCATCGCGTTAGCCATGGCAGCAACAAGCTGGGTACTTGAAACCAGTTCAACCTACTGGATATGGCATAGCTTTTGGCATGTCACAATATACACATCATCTTTCTTCTTTCTTTGCTCAAAAGCAAGTAATGTGGATGCAGAGGAGGATCAGCTACCTACGACGGAAAACTATGCGCTTACTCGCCAAGACTCGTTTTCGAGAAGCGAGTCTTAA 2487 0.417 MSFNSILWCHPKLILLTVLLLFGSSLCTSVSEGELVGTTVSGGNFFTVSSFSYPETTIKPFDLRYIRVDIPPSFSAVSIALNSDVDLDLSRVDRIPKSSLPIICFRDGSPPLPDALNTTLKDSVVSGINDLDVEQCFPMQKNITMRLTNEQISAGAWYIGLFNGIGATRTQSKMINRGSSYSFIANISVEACTNSMMKGVFCNSTVYPLSCTSSNVFKYYDLDATEVKKPMMENALTCKNNFETSCVQEGVPQFYSLDITNMAEELTITAANVKFNSTSSNSTSSADDFKLMCYARHGAIPSETSHDYSSDLSKSPLVIRAPQIGRLYISILPVNLAKTLDGTQDGNAKVCYSMETQVVQCPLGKAGPNCTMDSYTLQTVLSRIPMPFESYYLPVGEVEMAESANFPLEPLSNNTMNQGETDNIWTYFILDIPRGAAGRNIHVRLSSDVKINYEFYARFGGLPSLESWDYYYANKTRKSDESAFFMLYSSKDDNVDFYIIYAREGTWGFGLRHLNASGNSLKAQTAMSISLEGCPKHCSSHGDCRYSFDASGLTSYSFCSCDRNHGGFDCSVEIVSHKGHIVQSIFLIASNAAAMLPAYWALRQKAYAEWILFTSSGISSAIYHACDVGTWCPLTYNVLQFMDFWLSFMAVVSTFVYLASINETHKRAIHTAVAIFTALMAATKATRSSNIVLVFVLGAIGLLIGWLIEVSSKYRSLSFSFRFSPSFPQSLLTIKDWLYKLVMSLWRRFHWGFALAGFIALAMAATSWVLETSSTYWIWHSFWHVTIYTSSFFFLCSKASNVDAEEDQLPTTENYALTRQDSFSRSES* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0398 828 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 15 827 - -
Amo02g0398 828 Pfam Protein of unknown function (DUF3522) 580 785 IPR021910 GO:0016021
Amo02g0398 828 Gene3D - 476 574 - -
Amo02g0398 828 ProSitePatterns EGF-like domain signature 1. 559 570 IPR000742 -
Amo02g0398 828 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 15 827 IPR021910 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0398 Amo-Chr2 4912969 4919474 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0398 - - gmx:100777848 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g2799 04 102148755 102155014 Amo02g0398 02 4912969 4919474 PCT
Amo02g0398 02 4912969 4919474 Amo04g2799 04 102148755 102155014 PCT