Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g2356 ATGAAAGATGGGATGGGATTGGGAACGAAGGTGTCGTTTGGTGTGATCGGAGTGAGTTTTGTGATATTGGTTGCGGTGAAGATGTCGGAGTTGTTGAATAAGGCGAAGAACTATGTGAACGATAAAGTGGCCAACATGCCGAAGCCCGAGGCCAGTGTGGCTGACGTGGATTTCATGCGCGTCGGGAAGGATGGCGTCGAGTACCTTGCCAAGGTTAATGTTTCCAATCCCTATTCTACCCCTCTTCCCATTTGTGAGATCAAGTACTCTCTCAAGAGTGATGGCAGAGAGATAGCATCAGGTGTAATACCAGACCCTGGTTCATTGAAGGCAAATGGGACAACATTGCTTGATGTCCCAGTTAAGGTTGCTCACAGCATATTAGTGAACTTGATTAGGGACATTGGTAGAGACTGGGACATTGATTACCAATTGGACCTTGGCTTAGTTATTGATATTCCTTGTGTTGGTAACATCACCATTCCTGTTTCTCAGAAGGGAGAGATTAAGCTTCCAACCCTCAAGGACATGTTTACTGGTGGCTCTAAGAATACTGATCCTGCTCCTGCTCCTGCTACTACCTAA 585 0.4615 MKDGMGLGTKVSFGVIGVSFVILVAVKMSELLNKAKNYVNDKVANMPKPEASVADVDFMRVGKDGVEYLAKVNVSNPYSTPLPICEIKYSLKSDGREIASGVIPDPGSLKANGTTLLDVPVKVAHSILVNLIRDIGRDWDIDYQLDLGLVIDIPCVGNITIPVSQKGEIKLPTLKDMFTGGSKNTDPAPAPATT* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g2356 194 PANTHER - 19 186 IPR045043 -
Amo04g2356 194 PANTHER DESICCATION-RELATED PROTEIN LEA14-RELATED 19 186 - -
Amo04g2356 194 Gene3D - 44 178 - -
Amo04g2356 194 SMART why 51 168 IPR013990 GO:0009269
Amo04g2356 194 SUPERFAMILY LEA14-like 30 177 - -
Amo04g2356 194 Pfam Late embryogenesis abundant protein 71 167 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g2356 Amo-Chr4 95796414 95799208 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g2356 - - gmx:547837 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3514 14 138736902 138739451 Amo04g2356 04 95796414 95799208 hybridization
Amo04g2356 04 95796414 95799208 Amo02g0314 02 3868039 3870124 PCT
Amo02g0314 02 3868039 3870124 Amo04g2356 04 95796414 95799208 PCT