Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0314 ATGGCTCAGTTATTGGATAAAGCGAAGAACTTTGCAGCGGAGAAGATGAGTGATGTGGCGAAGCCTGAGGCGCATGTAACTGACGTGGACTTCAAGCGCGTGAGCAAGGATCACATTGAGTATTTGGCCAAAGTCTCTGTTCAGAATCCTTACTCTGCTTCTATCCCTATTTGTGAGATCAAATACTCTTTCAAAAGTGCTTCAAGGGAGATAGCAACAGGGAGAATACCAGACCCAGGATCACTGAAGGGTAAAGACACAACAATGCTGGATGTGCCAGTGAAGGTACCTTACAATGTATTGATGAGCTTAGCCAAGGACATTGGTGCTGATTGGGACATAGATTACCAATTGGACATTGGTCTTGTTATTGATCTTCCAGTCATTGGAAACTTCACTATTCCTCTCTCTCACAATGGGGAGGTCAAGCTTCCATCACTCTCTAGCATTATTCTCTTCGTAGCTTTTAAGCAGGTTGATCTATTTTGGATGGAACATTATTGTGATTTTCATGGCTGTGTTGGTGTACACTTACAAGAGAAGAGGATGCGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATACGAGAG 594 0.4411 MAQLLDKAKNFAAEKMSDVAKPEAHVTDVDFKRVSKDHIEYLAKVSVQNPYSASIPICEIKYSFKSASREIATGRIPDPGSLKGKDTTMLDVPVKVPYNVLMSLAKDIGADWDIDYQLDIGLVIDLPVIGNFTIPLSHNGEVKLPSLSSIILFVAFKQVDLFWMEHYCDFHGCVGVHLQEKRMRDVAQMVERSLSIRE 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0314 198 Gene3D - 17 151 - -
Amo02g0314 198 SUPERFAMILY LEA14-like 1 149 - -
Amo02g0314 198 PANTHER - 1 150 IPR045043 -
Amo02g0314 198 SMART why 24 141 IPR013990 GO:0009269
Amo02g0314 198 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Amo02g0314 198 PANTHER DESICCATION PROTECTANT PROTEIN LEA14 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0314 Amo-Chr2 3868039 3870124 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0314 - - adu:107472778 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3514 14 138736902 138739451 Amo02g0314 02 3868039 3870124 PCT
Amo04g2356 04 95796414 95799208 Amo02g0314 02 3868039 3870124 PCT
Amo02g0314 02 3868039 3870124 Amo14g3514 14 138736902 138739451 PCT
Amo02g0314 02 3868039 3870124 Amo04g2356 04 95796414 95799208 PCT