Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1615 ATGGCGTGGTTCAGGAAAAACTTACCTAAATTTGAGATACTCAAATCAAGCTATAACCCATCTTCAGCTTCATTTCATTTAAGGGTCCTCAGCTTCCTCACTCAAAATTGCTCAACATTTTTCTTCGCCATATGGCTGTCGCCGGCGAAGAATTTTAGCAAAAGGGAGTTCATAACGTTCGACACACTTTTCAAGGTCCACCCTCAAGGATGCTTGCTGATCCTATCAAGATCCATGGAGTCGAAACGAGGTTACCGGATCCTGAAACCGCTCCTAGACCGCGGCTTTAAAGTTCAAGCAATTACTCCGGATTTGCCATTCTTGGTCAAGAATACCCCAGCTCAATCTTGGCTTGAAGGGATCAAGAATGGCAACAGGGACCCTGGATCAATCCCAATATCTCAGAACCTCTCAAATTTGATGAGGCTAGCAATGCTATACAAGTATGGTGGTGTGTATTTGGACACAGATTTGATCTTTGTGAAGGATATGTCAGAATTGAGAAATGCAATTGGAGCACAATTTGTTGATCTAGAGACAAAACAATGGTTGAGGCTAAACTCAGCAATTATGATATTTGACATGAAACATCCAATTCTACTTGATTTACTAGAAGAATTTGCATCAAGTTTTGATGGTAATAAATGGGGTCACAATGGTCCTTATTTGGTTACTAAGGTTGTGGGGAGAGTAGTTGAAGGTAAACTAGGGTACAATTTAACTGTTTTGCCACCTAGTGCATTTTACCCTGTGGATTGGAACAAGATTAAGGACTATTACAAGAAGCCTACAACTGATTCTGGAATAACTTGGGTGGATAATAGGTTTGTGGAATTGATTTATGGAGGGAAGACTTATGCACTTCATTTGTGGAACAAGAAGACCAGAGATCTTGCGATTGAAGAGGGAAGCGTCATGGAAAAATTAATCCTTTACTTCAGTTCAACAAATCATGGAACAGATTCATCATCATTTGAAGAGTCAACAACTAGTGATTCAGAAAACTATGACCCTCTTATTCCACCGGCAAATGCATCAAGAGAAGTAAGAATGGCATGGTTCAGAACACAGATTCCTAAGCTAGAGTTACTACACTCTACAACATTGTCACAACAATTTCATGATAGAGTCACCGGTTTCTTGAACAAAGGTTGCTCTGTTCTGTTCCACATTATATGGTTTTCGCCGGCGAAACACTTTGGGAAAAGAGAATTTCTTACCATGGACACATTCTTTAAAGCCCACCCGGACGGGTGCTTAATAGTTGTGTCAAGATCAATGGACACCGACAGTGGATATGCAACTTTGAAGCCGTTGATTGATCGCGGCTTCAAAGTTGGCGCCATAACTCCGGACGTGCCCTTCTTGGTTAACAACACGCCGGCCGAGGCTTGGCTTGAACTGATCAAGAGTGGTAATAGAGATCCTGGAGACATTCCTCTGTCTCAAAACCTGTCGAATCTTGTTCGGCTCGCGATGTTGTACAAATATGGAGGCGGTTACATGGACACAGACATCATAGTGCTAAAAGATTTCTTGGACTTGAGGAATGCAATTGGAGCACAAAGTCTTGACTTCACTACCAAGCAATGGAATAGGTTAAACAATGCGGTTATGATGTTTGACATTAACCATCCTGTTGTGTGGGAATTTTTACAGGAATTCTCCACTACTTTCAATGGGAACAAATGGGGTAACAATGGACCATACTTGGTGTCGAGGGTTATGGCGCGGCTCGAAGGCCATAACATTACTATTTTGCCACCTAAGGCCTTCTACCCTGTGGATTGGAATGGAATTGGGAAGCTTTACAAGAAACCGGAAGGCGAATTGGAATCAAGATGGGTGGAAAGCCAGATTGATGAACTTTCTAATGGTGAGAGCTATGCTGTGCATTTGTGGAACAAGAGAAGCAAGAATTTGGCCATTGAAGAGGGAAGTGTCATGGCAAGATTAGTATCCACTCACTGTGTTAGCATGTACTCAAATTCCAAGATCCATTACTTCAACCTCAAAAGTCATGTTACTGACACAGCACCACAATTTGGATATTCCGAGAACAACGTTGTGATGGCAGAAGAACAGAAATCTGAAGAAGCAGAAAACTATGACCCTCTGATTCCCCCTGACAATGTTTCAAGAGATGAAAGGATTGAATGGTTCAGAAGACAGCTCCCTGAGATAGAGGTTCTAAAGTCAACAACATTATCACAACAATTTCATAGCAGAGTCTTCAATTTCCTCAACAAAGGTTGTTCAGTGTTGCACCACATCATATGGATGTCCCCAGCAAGATCCTTTGGCAAGAGAGAGTTTCTCACACTGGACTCATTCTTTAAGGCCAATCCGGATGGATGCTTGCTTATTGTGTCCCGGTCCATGGACTCGCCATGTGGATACGCAATCTTGAAGCCACTGCTTGACCGGGGGTTCAAAATCCAGGCCGTGACGCCGGATTTGCCTTTTTTGGTTAAGGACACGCCGGCTAAGCCGTGGCTTGAACAGATCAATAGTGGCACTAAAGATCCAGGATATGTACCATTGTCCAATAATTTGTCCAATCTTATCAGATTAACAATTTTATACAAATATGGAGGAGTGTATATGGACACTGACATTATAGTACTAAGAGATTTCTCTAATTTGAGGAACACAATTGGTGCACAAAGTTTAGACCCTGTGACTAGACATTGGGTCATATTAAATAACGGAGTTATGATTTTTGACATTAACCATCCAATTTTGTTGGAGTTTATGCAGGAGTTTGCAACAACTTTCAATGGTAATAAATGGGGATATAATGGGCCTCAATTGGTTCAGAGGGTTATAGAAAGAATGGGAGGAACTGAAGGGTTTAATCTTACAATTTTGCCTCCTAGGGCATTCTATCCTGTGGATAGGGTTAGGGCTTGGAGGTTTTTGAAGAAGCCACAAGATGAATCGGAATCAAGGTGGGTGGAAAATCAACTGAATGATTTGTCTGGTAGAGAGATCTACAGTGTGCATTTGTGGAACAAGAGAACAAAAGATTTGGAGATTGAAGAGGGAAGTGTTGTGGCTAAATTGATTTCGAATCACTGTGTTGTTTGTGACGGGATTATAAAAGCTTAG 3111 0.4166 MAWFRKNLPKFEILKSSYNPSSASFHLRVLSFLTQNCSTFFFAIWLSPAKNFSKREFITFDTLFKVHPQGCLLILSRSMESKRGYRILKPLLDRGFKVQAITPDLPFLVKNTPAQSWLEGIKNGNRDPGSIPISQNLSNLMRLAMLYKYGGVYLDTDLIFVKDMSELRNAIGAQFVDLETKQWLRLNSAIMIFDMKHPILLDLLEEFASSFDGNKWGHNGPYLVTKVVGRVVEGKLGYNLTVLPPSAFYPVDWNKIKDYYKKPTTDSGITWVDNRFVELIYGGKTYALHLWNKKTRDLAIEEGSVMEKLILYFSSTNHGTDSSSFEESTTSDSENYDPLIPPANASREVRMAWFRTQIPKLELLHSTTLSQQFHDRVTGFLNKGCSVLFHIIWFSPAKHFGKREFLTMDTFFKAHPDGCLIVVSRSMDTDSGYATLKPLIDRGFKVGAITPDVPFLVNNTPAEAWLELIKSGNRDPGDIPLSQNLSNLVRLAMLYKYGGGYMDTDIIVLKDFLDLRNAIGAQSLDFTTKQWNRLNNAVMMFDINHPVVWEFLQEFSTTFNGNKWGNNGPYLVSRVMARLEGHNITILPPKAFYPVDWNGIGKLYKKPEGELESRWVESQIDELSNGESYAVHLWNKRSKNLAIEEGSVMARLVSTHCVSMYSNSKIHYFNLKSHVTDTAPQFGYSENNVVMAEEQKSEEAENYDPLIPPDNVSRDERIEWFRRQLPEIEVLKSTTLSQQFHSRVFNFLNKGCSVLHHIIWMSPARSFGKREFLTLDSFFKANPDGCLLIVSRSMDSPCGYAILKPLLDRGFKIQAVTPDLPFLVKDTPAKPWLEQINSGTKDPGYVPLSNNLSNLIRLTILYKYGGVYMDTDIIVLRDFSNLRNTIGAQSLDPVTRHWVILNNGVMIFDINHPILLEFMQEFATTFNGNKWGYNGPQLVQRVIERMGGTEGFNLTILPPRAFYPVDRVRAWRFLKKPQDESESRWVENQLNDLSGREIYSVHLWNKRTKDLEIEEGSVVAKLISNHCVVCDGIIKA* 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1615 1036 Pfam Alpha 1,4-glycosyltransferase conserved region 908 1030 IPR007652 -
Amo04g1615 1036 Pfam Alpha 1,4-glycosyltransferase conserved region 541 663 IPR007652 -
Amo04g1615 1036 Pfam Alpha 1,4-glycosyltransferase conserved region 193 310 IPR007652 -
Amo04g1615 1036 MobiDBLite consensus disorder prediction 318 337 - -
Amo04g1615 1036 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 685 1031 IPR044789 -
Amo04g1615 1036 PANTHER 4-ALPHA-GALACTOSYLTRANSFERASE, PUTATIVE ISOFORM 1-RELATED 326 660 - -
Amo04g1615 1036 Pfam Glycosyltransferase sugar-binding region containing DXD motif 55 174 IPR007577 -
Amo04g1615 1036 Pfam Glycosyltransferase sugar-binding region containing DXD motif 403 523 IPR007577 -
Amo04g1615 1036 Pfam Glycosyltransferase sugar-binding region containing DXD motif 770 890 IPR007577 -
Amo04g1615 1036 PANTHER 4-ALPHA-GALACTOSYLTRANSFERASE, PUTATIVE ISOFORM 1-RELATED 1 311 - -
Amo04g1615 1036 PANTHER 4-ALPHA-GALACTOSYLTRANSFERASE, PUTATIVE ISOFORM 1-RELATED 685 1031 - -
Amo04g1615 1036 SUPERFAMILY Nucleotide-diphospho-sugar transferases 2 297 IPR029044 -
Amo04g1615 1036 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 1 311 IPR044789 -
Amo04g1615 1036 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 326 660 IPR044789 -
Amo04g1615 1036 SUPERFAMILY Nucleotide-diphospho-sugar transferases 718 1035 IPR029044 -
Amo04g1615 1036 SUPERFAMILY Nucleotide-diphospho-sugar transferases 390 695 IPR029044 -
Amo04g1615 1036 Gene3D - 385 589 - -
Amo04g1615 1036 Gene3D - 755 953 - -
Amo04g1615 1036 Gene3D - 99 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1615 Amo-Chr4 77092479 77110028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1615 318 658 Glycosyltransferase AT2G38150 56.734 1.36e-132 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1615 K01988 - fve:101292329 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2659 14 114130443 114131756 Amo04g1615 04 77092479 77110028 hybridization
Amo04g1615 04 77092479 77110028 Amo02g2491 02 78577089 78578342 PCT
Amo02g2491 02 78577089 78578342 Amo04g1615 04 77092479 77110028 PCT