Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2491 ATGTTTGACCCTAGACACCTTAAAAGTGCCAAGTTACTTTTATCCTCTCTGTTCATATTCTCTGCCATAATTTTTGTTATCCATGCATATAGTATCATCTACCATGATTTCCTACACTCTGCTACATATAAAGAACCTTCAGAGAATTTGCAAGCTCAGAGTCACAGATTCAAAGAGCAAATAAGACCAACACTTTCTAATCTGCCTTTACACTCCATTCAAGAAGAGAATGATAGAATTCAAGCTGGAAATCAGAATGACTTGGTTGCTCCTCTCGGTGTGACAGAATTAGAGAGAATAGCTTGGTTTCGGAAAAACCTGCACAAGTTTGATATTCTCAAGTCAAACAACTCGACCCGAAGATTTCACAGCAGAGTTCTAGAATTCTTCAGCCGTGAATGCGAGGCTCAGTTTTTCATGACTTGGATTTCGCCGGCAGGCTCGTTTGGTGTAAGAGAATTGATGTCCGTGGAAAGTGTTTTTAAGGTTCATCCCGGCACATGCCTTGTAATTCTGTCAAGAACTTTGGAGACCACGCACGGCTACACAGTGCTGAAACCGTTGCTTGACAGTAGGTTCAAGGTTCAGGTCGTGACCCCAGACTTGCCTTTTCTGTTCAAAGGGACACTGGCCGAAGCTTGGTTTCGTGAGTTAATAAAAGGTAAGAAGGATCCAGGTGAGATTCCTTTGTCACAAAATCTATCTAATCTGATAAGACTTGTAGTGCTCTATAAATATGGTGGAATCTACATAGATACAGACTTTATTGTTCTAAAACCATTAACTGGGTTGCGGAATTCTATAGGAGCACAAAGCATGGATTTAAGATCTAAGCATTGGACTAGATTAAATAATGCTGTTCTGATTTTCGATATGAAACATCCACTTCTTCACGAATTCATTAGTGAATTTGCATTGACTTTTGATGGAAACAAATGGGGGCATAATGGTCCATACCTGGTTTCTAGAGTGATCAAGAGGCTGCTGAAAAGACCCGGTTTCATATTTAAGATCTTGCCACCTACGGCTTTCTATCCAGCTGATTGGAATAAGATAAGGGGGTTTCTCAGGAAGCCGAAAACTCAAACTGAATCGAAATGGGTAGAAGCCAAAGTGCTTCAGCTCTGTGCGGAGACTTATGGGATTCATCTATGGAACAAGCAAAGCAGAAGATTGACAATAGAAGATGGAAGCGTCATAGGAAAACTTGCATTAAATCATTGTGTCATTTGCAACCATATATTTAGTTCTTAG 1254 0.4027 MFDPRHLKSAKLLLSSLFIFSAIIFVIHAYSIIYHDFLHSATYKEPSENLQAQSHRFKEQIRPTLSNLPLHSIQEENDRIQAGNQNDLVAPLGVTELERIAWFRKNLHKFDILKSNNSTRRFHSRVLEFFSRECEAQFFMTWISPAGSFGVRELMSVESVFKVHPGTCLVILSRTLETTHGYTVLKPLLDSRFKVQVVTPDLPFLFKGTLAEAWFRELIKGKKDPGEIPLSQNLSNLIRLVVLYKYGGIYIDTDFIVLKPLTGLRNSIGAQSMDLRSKHWTRLNNAVLIFDMKHPLLHEFISEFALTFDGNKWGHNGPYLVSRVIKRLLKRPGFIFKILPPTAFYPADWNKIRGFLRKPKTQTESKWVEAKVLQLCAETYGIHLWNKQSRRLTIEDGSVIGKLALNHCVICNHIFSS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2491 417 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 417 - -
Amo02g2491 417 Pfam Alpha 1,4-glycosyltransferase conserved region 290 413 IPR007652 -
Amo02g2491 417 Gene3D - 137 338 - -
Amo02g2491 417 SUPERFAMILY Nucleotide-diphospho-sugar transferases 91 416 IPR029044 -
Amo02g2491 417 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 417 IPR044789 -
Amo02g2491 417 Pfam Glycosyltransferase sugar-binding region containing DXD motif 152 272 IPR007577 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2491 Amo-Chr2 78577089 78578342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g2491 24 417 Glycosyltransferase AT2G38150 47.118 2.64e-135 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2491 K01988 - gmx:100781975 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2659 14 114130443 114131756 Amo02g2491 02 78577089 78578342 PCT
Amo04g1615 04 77092479 77110028 Amo02g2491 02 78577089 78578342 PCT
Amo02g2491 02 78577089 78578342 Amo14g2659 14 114130443 114131756 PCT
Amo02g2491 02 78577089 78578342 Amo04g1615 04 77092479 77110028 PCT