Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0358 ATGGGTATCATGACCACCACTCACCGCAAGCGCACCCAAGAATGCATGAACTTCCCCCATTTTCAATCCCACCAGATTCCCCAATCTCCCATTCCCTCTATTTCTCATACTAAGCGACCTAAATTATCACCTTCTATTATACCCACACCTACACCCGCCACCCGACCCCTTTCCACCGCCACCACCGCCACTGGTAACCGGATCTCCCGGTACCCTGAGCCCAAGGGGCCCTTCCGCAGGGAGGTTCACGCTCCTTGCAGGCCCAATAAATTCGTTTTTTCGGGCTCCAGGGCTGCTAGGGTTACCGCATATTCGCATCGGAACGACGAGCACATCGGTGACGACGACACCGACGACGGCATGGGAAACTTTTTGGCGCGAAGCTACGGGATTGTGAAGCAAGCGGTGTATGATTTCACTGGGAAGGGGAAGAAGGAGGTGGTGGAATTGGACGCTGATGAGCGCGGGCAGGACGAGGCTTCGGAGGATTTGAGCGTTCGGGAGGTTGAGAATGTCGAAATTGGGGGTGAAGGGAGGTCGCTGGTGGCGGACAAGAGGTGGATTGGGAATGATGCAGTTGTGGTTGAGGTGCCGGAGGTGGAATTCGTAGATGCTAGGGCTGGGGACGGGAGGAAGTCAACGTCGACGGTGGTGGATTCGGAGTTGACTAATAGTGGTTTGAAGATGGTGGAAAATGATGCTGCAGGGATGGGTTTGGCTGCTCTGATCCGTGAGCATGAGCAGAACCCTGAAAATGTTCATCTTTATAAGAAGTTGCTTCTGGCAGCTGGCAGAAGAGACGACAAACTCGGGTGGCTGAGCTTTGAAATTGAGCGGAACGAGAAAAAGATAGCTGGATTCGAATTGTTGCGGCCGAAGAAGGCAGAACCAGTTGAGAAAGTACCACGTGAACCATTTCTCGCACTTACAGAGGAAGAGGAAGATGAGGTTGCAAGTGCCTTTTCAGCCAACCGAAGGAAGATCTTGGTTACACACGATGAATCCAACATTGAGATAAGTGGAGAAAAGTTTCAGTGCCTTAGGCCAGGTGCATGGTTGAACGATGAGGTGATAAATTTGTACCTTGAGTTGCTGAAAGAGAGGGAGAAAAGAGACCCACAGAGGTTTCTTAAATGCCATTTTTTCAATACATTTTTCTACAAAAAGCTAATAAGTGGCAGGAGTGGTTATGATTTCAAATCTGTCAGAAGATGGACCAGCCAAAGGAAATTAGGATATGGTCTAATTGAATGTGATAAAATTTTTGTGCCTATACATAAAGAGATCCACTGGTGCTTGGCTATTATCAATAAGAAAGATCAGAAATTCCAGTATCTTGACTCATTGAAAGGAATGGACAACCAAGTGCTGAAAGTACTGGCTAGATATTATGTGGACGAGGTGAAGGACAAGACTGGTAAAGACCTAGATGTGAGTTCTTGGGAAAAAGAATTCGTTGAAGACCTTCCTGAGCAGGAGAATGGGTATGATTGTGGGGTGTTTATGATCAAATATGCCGACTTCTATAGTAGAGGCCTGGGGCTGTGTTTTAACCAGGAACATATGCCCTACTTCCGCCAGAGGACAGCTAAGGAGATATTGAGATTGAGAGCTGAATAA 1620 0.4802 MGIMTTTHRKRTQECMNFPHFQSHQIPQSPIPSISHTKRPKLSPSIIPTPTPATRPLSTATTATGNRISRYPEPKGPFRREVHAPCRPNKFVFSGSRAARVTAYSHRNDEHIGDDDTDDGMGNFLARSYGIVKQAVYDFTGKGKKEVVELDADERGQDEASEDLSVREVENVEIGGEGRSLVADKRWIGNDAVVVEVPEVEFVDARAGDGRKSTSTVVDSELTNSGLKMVENDAAGMGLAALIREHEQNPENVHLYKKLLLAAGRRDDKLGWLSFEIERNEKKIAGFELLRPKKAEPVEKVPREPFLALTEEEEDEVASAFSANRRKILVTHDESNIEISGEKFQCLRPGAWLNDEVINLYLELLKEREKRDPQRFLKCHFFNTFFYKKLISGRSGYDFKSVRRWTSQRKLGYGLIECDKIFVPIHKEIHWCLAIINKKDQKFQYLDSLKGMDNQVLKVLARYYVDEVKDKTGKDLDVSSWEKEFVEDLPEQENGYDCGVFMIKYADFYSRGLGLCFNQEHMPYFRQRTAKEILRLRAE* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0358 539 MobiDBLite consensus disorder prediction 22 44 - -
Amo04g0358 539 Gene3D Adenoviral Proteinase; Chain A 297 536 - -
Amo04g0358 539 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 59 538 - -
Amo04g0358 539 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 59 538 - -
Amo04g0358 539 MobiDBLite consensus disorder prediction 22 61 - -
Amo04g0358 539 ProSiteProfiles Ubiquitin-like protease family profile. 337 509 IPR003653 GO:0006508|GO:0008234
Amo04g0358 539 Pfam Ulp1 protease family, C-terminal catalytic domain 352 533 IPR003653 GO:0006508|GO:0008234
Amo04g0358 539 SUPERFAMILY Cysteine proteinases 305 537 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0358 Amo-Chr4 6665551 6670632 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0358 K08592 - jre:108994812 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3469 01 107276622 107280805 Amo04g0358 04 6665551 6670632 PCT
Amo04g0358 04 6665551 6670632 Amo01g3469 01 107276622 107280805 PCT