Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2429 ATGGCAGCGACAACAACAACAACAACAAGTGCAGCAGCAACAACATCTCTCCTCAAATTACAAAACCAACCCATCAAACCCAAACGTCGCAAGTGCCGAGAAACCACCATCTCCACCTCTGCCCAGGCCCAGGCCCAGGCCCAGGACACTCCCTCTCCCAGTCCATCCTCSGACTACAGGATTCGGTTCTCGCCGGGGCGGTGCTCCCCAATCATGGACTTCATCCAGGCATCCCCAACGGGCAGCAACGGGCACTCGGACCCCTTCCCTTCCAGCTTCACGAAATTCAACTCCGCACTGACGGCGGGCCTCCTGAACCCAATGTCCCCTCCGCCCGACAAGACCCGATCCAGCCCCACACTCTTCGAGATGATGGCCAGCGAGCCCGACACTGCGAGCCACCACAGGCCTCACTCTCAGTCTCAGATCCAACCCCCTAAAMCCCATGTTCCCGTTCTCGACAGGCAAACCCTAATGATGCAGCGGATTTCGGAGCTRTTGGGGTCTCGCAGCCCCGGCAACCAGTTCAACGACGCCGTTTCCAGTGACATRAAGCTCACTCTCACCTCCAAGGATGGCTTTAGTGTKTCCATGAACGTTCATCGCCAAATTCTTGTTGCCCACAGCAGGTTCTTCGCCGTCAAGCTCTCTGACAGGTGGACCAAGCAGAACCCTAGGCCAACTACGCCCTACTTGGTCGAGATCGCTGACTGCGACGACGTTGAGGTTTACATTGAGACCTTGAGCCTTATGTACTGCAATGATATCAGGAAGAGGCTCATGAAGGAGGATGTCTCCAAGGTTTTGGGTATCTTGAAGGTTTCGGCTGCAATTGGATTTGATGCTGGGGTTTTGTCTTCTTTGGAGTATTTGGAAGCGGCACCATGGGCAGAGGATGAAGAGGAGAAGGTTGCCTCCCTCTTGTCTGAGCTTCGTCTTGAATCTGTTGGAGCCGGGGATGTTTTGAAGAGGGTTTCGACTGAAGTGGCAAATGGCAARGAAGAGGGGGGTGATAACGAGGAAGTTCTTCTGAAGCTTATTCGTGTGGTTCTTGAAGGCAAAGATGAGAAGGCCAGGCGTGAYATGAAAGGCCTGGTGTCAAAGATGCTTCGTGAGAATTCGTCCCAGAATGACCTACGGAAAGAGTCATTGTACTTGGCATGTGATGATTGTATGCAATTACTTCATCACCACTTTTTGAAGGCTGCAGCTTCAGACCTGAAGGATGTGGGTCAAATCGCAAGACAGGCTGATAATTTGCATTGGCTTTTGGATATTTTAATTGATAGACAGATTGCTGAGGATTTCCTGAAGACATGGGCTTCTCAGTCAGAATTATCTGAAGCACATTCTAAAGTTCCATCAGTTCACAGGTTTGAGGTTAGCAGAGTCACCGCTAGGTTGTTTGTTGGGATCGGGAAGGGGCAATTATTGGCTTCTAAAGATGTTAGGTGTTTACTTCTGAAAACATGGCTGGTGCCCTTTTATGACGACTTTGGTTGGATGAGGAGGGCATCCAAAGGCCTTGACAGGAACCTAATCGAGGATGGTCTTAGTAACACAATTCTCACTCTGCCACTGTCCTGGCAGCAGGATATTTTGCTTGCTTGGTTTGACCGCTTCTTGAATTCTGGAGAAGATTGCCCAAATATTCAAAGAGGATTTGAAGTTTGGTGGAGAAGAGCTTTCTGGAAACGGAATGGAGAGCAAGAACAGACAAGACAATTACGAATTACAGCTACAACAGTTGATAATCCTTGA 1761 0.498 MAATTTTTTSAAATTSLLKLQNQPIKPKRRKCRETTISTSAQAQAQAQDTPSPSPSSDYRIRFSPGRCSPIMDFIQASPTGSNGHSDPFPSSFTKFNSALTAGLLNPMSPPPDKTRSSPTLFEMMASEPDTASHHRPHSQSQIQPPKXHVPVLDRQTLMMQRISELLGSRSPGNQFNDAVSSDXKLTLTSKDGFSVSMNVHRQILVAHSRFFAVKLSDRWTKQNPRPTTPYLVEIADCDDVEVYIETLSLMYCNDIRKRLMKEDVSKVLGILKVSAAIGFDAGVLSSLEYLEAAPWAEDEEEKVASLLSELRLESVGAGDVLKRVSTEVANGKEEGGDNEEVLLKLIRVVLEGKDEKARRDMKGLVSKMLRENSSQNDLRKESLYLACDDCMQLLHHHFLKAAASDLKDVGQIARQADNLHWLLDILIDRQIAEDFLKTWASQSELSEAHSKVPSVHRFEVSRVTARLFVGIGKGQLLASKDVRCLLLKTWLVPFYDDFGWMRRASKGLDRNLIEDGLSNTILTLPLSWQQDILLAWFDRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEQEQTRQLRITATTVDNP* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2429 586 Gene3D Potassium Channel Kv1.1; Chain A 160 293 IPR011333 -
Amo03g2429 586 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 34 584 IPR038920 -
Amo03g2429 586 PANTHER OSJNBA0011J08.25 PROTEIN 34 584 - -
Amo03g2429 586 MobiDBLite consensus disorder prediction 1 90 - -
Amo03g2429 586 MobiDBLite consensus disorder prediction 36 59 - -
Amo03g2429 586 ProSiteProfiles BTB domain profile. 182 260 IPR000210 GO:0005515
Amo03g2429 586 MobiDBLite consensus disorder prediction 1 22 - -
Amo03g2429 586 MobiDBLite consensus disorder prediction 75 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2429 Amo-Chr3 104351303 104354622 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2429 - - ccaj:109800730 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3424 13 115157566 115161435 Amo03g2429 03 104351303 104354622 hybridization
Amo03g2429 03 104351303 104354622 Amo10g2084 10 74669977 74671908 PCT
Amo03g2429 03 104351303 104354622 Amo20g2574 20 120523282 120526088 PCT