Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2088 ATGGCTGCTTTTGAGGTAAGGCCATTGGTGGAACATGAGGAAGGATATTCCGAGGATCACCAAGAGCCTGGCAGCATGTGCGGTTCTGGATGCTTCCAGGTTTTCGAGTTGGGATGGTGGCAAAGCCACGGCGAAGGCAAAGGCTTGGCAGAGCAAAAGGGAGAGTCCTGGTTGAGAACCAGGTTGAGGAAGATGAAGGAGTTGTCAGAAGTGATTGCAGGTCCCAAGTGGAAGACATTCATTCGAAAGGTAAATGGTTACGGCAAGAAGCAGCAGAGGAACAGGTTTCAGTATGATGAACACAGTTATGCGCTGAACTTCAACAGTGGAGTTCCGAGTGAAGACGAAGATATGCCTCCCAGTTTCTCAGCAAGGTATAGCGCTCCTTTTGCAGTTGAACGTGGCCAAACCGAACAATGA 420 0.4952 MAAFEVRPLVEHEEGYSEDHQEPGSMCGSGCFQVFELGWWQSHGEGKGLAEQKGESWLRTRLRKMKELSEVIAGPKWKTFIRKVNGYGKKQQRNRFQYDEHSYALNFNSGVPSEDEDMPPSFSARYSAPFAVERGQTEQ* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2088 139 PANTHER STRESS INDUCED PROTEIN-RELATED 12 137 - -
Amo03g2088 139 PANTHER NHL DOMAIN PROTEIN 12 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2088 Amo-Chr3 77775995 77777231 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2088 - - gmx:100815807 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3109 13 90895524 90895943 Amo03g2088 03 77775995 77777231 hybridization
Amo01g3118 01 102579641 102580947 Amo03g2088 03 77775995 77777231 PCT
Amo03g2088 03 77775995 77777231 Amo01g3118 01 102579641 102580947 PCT