Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3118 ATGGGTTCTTACGAGGGAAGACCATTGGTGATGGAAATGGAGCACGATCGAGGTTTTGAAGGCCTGGAAGATGGTAGCGGATGCGGATGCGGATGCTTTCGTAGTCTCAGCTTGAGGTGGTGGCGCGGCGGCGACGAAGAAGGTAAGCGTTTACTGGCGGAGCAAAAGGCTGTCGGCGGCGAAGGAGAACCATGGATGATGGAAAAGTTAAGGAAGGTGAAGGAGGCTTCGGAAGTGATTGCGGGTCCAAAGTGGAAAACTTTCATAAGAAAGATAAGTGGGTATGGCAAGAAGCATCAAAAGCAGAGGTTTCAATATGATGAACACAGTTATGCTCTCAACTTCAATAGTGGAGCTCAAAGCGAAGATGAAGATCACATACCTCCAAGTTTCTCAGCCAGATTTTCTGCTCCTATTCCTGTTGGTCGCCGCCAAAATGAGTCATGA 447 0.4855 MGSYEGRPLVMEMEHDRGFEGLEDGSGCGCGCFRSLSLRWWRGGDEEGKRLLAEQKAVGGEGEPWMMEKLRKVKEASEVIAGPKWKTFIRKISGYGKKHQKQRFQYDEHSYALNFNSGAQSEDEDHIPPSFSARFSAPIPVGRRQNES* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3118 148 MobiDBLite consensus disorder prediction 117 148 - -
Amo01g3118 148 PANTHER STRESS INDUCED PROTEIN-RELATED 11 147 - -
Amo01g3118 148 PANTHER NHL DOMAIN PROTEIN 11 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3118 Amo-Chr1 102579641 102580947 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3118 - - gmx:100804202 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3118 01 102579641 102580947 Amo13g3109 13 90895524 90895943 PCT
Amo01g3118 01 102579641 102580947 Amo03g2088 03 77775995 77777231 PCT
Amo13g3109 13 90895524 90895943 Amo01g3118 01 102579641 102580947 PCT
Amo03g2088 03 77775995 77777231 Amo01g3118 01 102579641 102580947 PCT