Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1177 ATGGTATTTGAAACAGCTTCTTCTTTCATTGCCAGCTGGCTCACACCCACTTGTCTCTTCGTCTTCGTCAACCTTGTCATCGGTACCATAGCCATCGTTTCTCGTTTCGCCACCCATCATCAACGGCAGCAAGTTGACTCTTCGGGTCAACTCGTCCGTTCTACTTCTCTTCTGGACCGCGTCATGTCCTTCAACCTCTATTCCTATAAAGATGATGGACATAACTCAGTTCAGGAGAATCACGAGTTGGCCCAACAAAGTCTGGGTCAATCTGTGTTAGACCAAGTCAACTCCTCCGAAAGAATGGATGACTCAGCTCAATATGAGTTGACCCGGACTCCATCTTTGTTGGAAAGATTAAAGTCAATAAAATTCTACAAATCAGAATCAACAAAGAAAGTTAAAGAGGAAGAACCTGAATTCGGATCCGGACACCAACCCAGTGCTACAAAGGACGGGTTGGATCGGGTGAATTCGGATGAGGATAGAAGAATAAGGAACTTATTATCGAGAAGGTGGGAGGGAGAGGAGTTATTGGGAGAAGAAGTAGACAAGAAAGCTGATGATTTCATCAACAGGTTTAAGCAGCAGCTTAGGCTTCAGAGGCTTGATTCAATACTACGTTATAGAGAGCTGCTCAAGAGAAATTAA 651 0.4409 MVFETASSFIASWLTPTCLFVFVNLVIGTIAIVSRFATHHQRQQVDSSGQLVRSTSLLDRVMSFNLYSYKDDGHNSVQENHELAQQSLGQSVLDQVNSSERMDDSAQYELTRTPSLLERLKSIKFYKSESTKKVKEEEPEFGSGHQPSATKDGLDRVNSDEDRRIRNLLSRRWEGEELLGEEVDKKADDFINRFKQQLRLQRLDSILRYRELLKRN* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1177 216 PANTHER COTTON FIBER (DUF761) 7 82 - -
Amo03g1177 216 PANTHER COTTON FIBER (DUF761) 162 215 - -
Amo03g1177 216 Pfam Domain of unknown function (DUF4408) 8 36 IPR025520 -
Amo03g1177 216 Pfam Cotton fibre expressed protein 181 215 IPR008480 -
Amo03g1177 216 MobiDBLite consensus disorder prediction 134 158 - -
Amo03g1177 216 PANTHER DUF4408 DOMAIN PROTEIN 7 82 - -
Amo03g1177 216 PANTHER DUF4408 DOMAIN PROTEIN 162 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1177 Amo-Chr3 27338210 27339319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1177 - - adu:107479034 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2762 01 98417471 98418736 Amo03g1177 03 27338210 27339319 PCT
Amo03g1177 03 27338210 27339319 Amo01g2762 01 98417471 98418736 PCT