Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2762 ATGGCAGAACCAACAGCTTCAGTGACGCTTCTCATAGCCAGCTGGTTAACACCTTCTTCCCTCTTCATCTTTGTCAACCTCGTCATTGGCACCATTGCCATCACCTCCCGCTTCACCTCCTCCCCCAACAACCGAATTCAAGAACATGAACTCCAACACCCTTTCACTCGCTCACCCTCCCTCCTGCAACGAGTCAGATCCTTCAGACTCACTCATCAATACACCTACGACACAACGCCGAGTACTGCCGAACCCGGCGAGTTCACTCAGCCTCAACTCGTTCGAACATCCTCGCTTTTGGAACGAGTCAGGTCCTTCAATTTCAGCCTCCACAAACACGAAACCACGGAAACATCACATGCAGAAAAAACAGATCATAACCAGTCCCAGGCCCAGGCCCAGGCCCAAACCAACCAACCGGAATCCGAAGAGCCGGAGAAACCGAAAGAAGTACCGCAGCTGAGACGAACTCCGTCGCTGTTGCAGCGCCTTCAGTCTATGAACTTCTCGCGCCTCTACAGAGGAGAAGAAGAACCCGAACCAGCCGAGGCAAGTGGTTCGGGTTCGGATCCGAGTCGGAAGGATGCTGAGATGAGGAAATCAGCGAGCGAGAGGGGGCATAGCGAGCGGGTGGAGGATGAGGAGTCGGTGGAGAGGCGGAGGCCGGCGACGACGAGGGAGTCGACGGGTGAAGACGAGGAGGTGGACGCGAAAGCGGACGATTTCATAAACAGGTTCAAGAAGCAGCTGAGGCTGCAGAGGGTTGATTCCATTCTCCGTTACAGAGAGATGCTCAGAGGAAACTGA 807 0.5465 MAEPTASVTLLIASWLTPSSLFIFVNLVIGTIAITSRFTSSPNNRIQEHELQHPFTRSPSLLQRVRSFRLTHQYTYDTTPSTAEPGEFTQPQLVRTSSLLERVRSFNFSLHKHETTETSHAEKTDHNQSQAQAQAQTNQPESEEPEKPKEVPQLRRTPSLLQRLQSMNFSRLYRGEEEPEPAEASGSGSDPSRKDAEMRKSASERGHSERVEDEESVERRRPATTRESTGEDEEVDAKADDFINRFKKQLRLQRVDSILRYREMLRGN* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2762 268 PANTHER DUF4408 DOMAIN PROTEIN 89 267 - -
Amo01g2762 268 PANTHER DUF4408 DOMAIN PROTEIN 6 76 - -
Amo01g2762 268 Pfam Domain of unknown function (DUF4408) 12 38 IPR025520 -
Amo01g2762 268 MobiDBLite consensus disorder prediction 114 242 - -
Amo01g2762 268 Pfam Cotton fibre expressed protein 232 266 IPR008480 -
Amo01g2762 268 MobiDBLite consensus disorder prediction 190 242 - -
Amo01g2762 268 MobiDBLite consensus disorder prediction 125 141 - -
Amo01g2762 268 PANTHER COTTON FIBER (DUF761) 6 76 - -
Amo01g2762 268 PANTHER COTTON FIBER (DUF761) 89 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2762 Amo-Chr1 98417471 98418736 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2762 - - aip:110263604 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2762 01 98417471 98418736 Amo03g1177 03 27338210 27339319 PCT
Amo03g1177 03 27338210 27339319 Amo01g2762 01 98417471 98418736 PCT