Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2711 ATGGCTCATCACCAACTCATCGACTCGCTCACCTCTCACATCTCCCTCTACCACTCCCATTCCCAATCCCAATCCTCAAACCCTAACCCTAACCCTAGATCCCAAATTCTCAAATGGTTTTCATCCCTCTCCCTCCAACACCGTCAATCCGCACTCACCATCGTCGATCCAACCTTCGTCCAAACTCTCCTCCGCATGATATCCAAGCTCCGATCCAACGGCCATGGCTCCTTCATTGTTCTTCCTGACCTTCCCTCCACTCATCCTCCATTCCTCCCCACTCTCTGCTTCAAGCGCTCCCGTGGCCTCCTTGCACGCGCTGCCGATTCCGCCGACTCGGCCGTGGCCGGGCGGGTTCTTTTTGACTCCGCCCGGCTGTTCGAGTCGGCTGAGGGAAATGAAGGCGCTGGAGCGTGCTCCTGTTCGGCGGCTTGCCTCGACGCCTTTACCGTTGCTGAGAATTTGGTGGATGACATTGACCGGTTTGTGGACGTTATGGACCGAATTTCGAATGGCGGGTTCTTGAGAGGGGAGGAGAATGAGATTGGGAATAATTGGGTTGAGCTGAATTGGCTAAAGGCAATGGGGTATTATCGGATTGAGGCGTTTTTGGCGAATAGGATTGAGGTTGCGATGCGGCTGGCGTGGTTGAATAGTGGGGGAGGAGGTGGAGGGGGAGGAGGGAGGAAGAGAGGTGTTAAGTTGAAGGAGAAGATGAATTTGGCCGGAGTCTCAGCGAATGTGTTTTGGAGGAAGAAGGGATGTGTGGATTGGTGGAGTAATCTGGATGCTGTGACAAGGAAGAGGGCCTTAACAACAATTTTGAGCAGAGCTGCAAAACCTTTGACTCGTGAAATTTTGGAAGTGGCACATAATGCCTCTCAGGATGAGATTTGGCTATACAGTGTGGGAGTTGATAAATTTCTTCAATATAACCGTACTGCATCTGCTCAAAGGACCACCACAGCATTTCCCAATGATGTAGAATTTGGAACAGTTGTTACACCATTAGCTTTTTGTAACAAACCTTCCGCTTTAGCCAGAGCCCTTAATTCTTTGCTCGTGCTTCTAGATGTTAATATGGTGATAACATCAGTTCTTAATATTGACTACGATATAGGAGAGCTATTCTTTAGTTCATTGGATTCTGTGTGTACTGTTTCTGATTGTATATTGCGAAAAATACGAGGACTCCTAATGGTTATATCACTGGACTGCACAAAATTTGAACTTCTATCAGAGGAGCTTGATAAATCTTCATCAGGAAGGTCTAAGGAAAAGCCTAGTGCGTCTAATCGTAAAAAGAAGGGACGATCCCGCAACACTAAGAAGCAAAATCATGTCCCTTACACATGTGTGAATGGTATTTCACGTGAAAAGCCACAAAAGGACATTGATTGTTTAGTGGATAATGAAAAGAAGGCTGATTTAGTGGGATCCAAGGAACCTCCTAATGATCATCTTGGAAAGGAGATTTCTACTGGGAGCATATCGTCAACTGCAAAAAAGGATCATACTCGGCGGTTGGACGCTAACAAACTTCGAACTAATTCAAGAAAAAGTAGGAAAGAGAAAAATAAATGTAAAAACACAACCACTGGCCGTGAAGCTAGCAATTTTCAAAAGTCCATTATAGATGCTGCCTCTACGACTGTTATTTTTGAAGGTGAGGTGGGAATATGTGATATGGTTTTTGATAAATCTTCCATTGAAAATGCCAAAAATGATTATTTGAATGGTAGTGACATCCACTCCTCAAGTACAAAGAACAGTTTTGCCGAGGCGATTGAGCAAGAAAATGTTGAGTATCTTTCTAAAAGTTGCAATGGTTTAGGTCCTCAGCGTTGTTTAGCATCAAATCAAGGGAAAACTATGTCTCAGGAAATAGATTGTTCAGCTTGTGATGTAGATTGTAATGGACAAAATCCTCCGGCACATGAATTGAAGCATGGTAGTTTCTCCAGTAAAGAAGATACAGGTTCTCTTAACTCCGTATGTGTTCCAGAAGCTGATGTAAAGCCATCTGTTCCTGACAAACTAACCAGAGAGGTTCATGTAAAGGAATTTGGGCTATTGAAGGAGCGAGATAGATGCCTATTTGAATGTAGAAATTCAGCTTTCTCGAAATGTAGTCCATATGAGTGGCCTGGTGTACCTTCTGTATATTTTCCATCTTTTAATTCTCATCTCCCTCCTGCTACTGATAGATTGCATTTGGATGTTGGGCGGAATTGGCATAATCACTTTTGCCACTCATTTGTCCCCACATTACAGCAGGCAAGAAACACTCCTATTGAAGGTGGACGCAACCCAATACTGTCTCGTCCTATTCCTATGAGTTTAGACTGGCCTCCTGTTTTTCGTGGTGGCATGGCTGCACCGCCAAACGGTAATTATGATTCGGGTTTTATGACCCGGCGGCAGTGTACCTTTTCAAAAGGATTGGCTGTTCACAGCGTCCAGGTTGATGCAACAACTCCAGATGATGAAAGAAAATATTCTGGGGATATATTTGATTTACCTCCTGATATAGCAAATGCGCAAGAGCTAGCAGATGAATTTGACAATCATTGGGTATCAGAAGAAGAGTACGAGGTTCATGCTGTTTCTGGAATAGATTATAACCAATATTTCGGTGGTGGCATAATGTATTGGAACTCTTCTGATTATCCAGGAAATGGTTTCTCCCGGCCACCCTCTCTTAGCTCTGATGACAGTTTATGGGCTCTGCGTGAAGCTGATATGAATAGGGCAGTGGATGACATGGTTGCTTTCTCATCTTCATATAGTACAAATGGTCTGACTTCACCCACTGCTGCTGCCTTTTGTTCGCCTTTTGATCCTGTAGGGACTGGTCCTCAAACTGTCAGTTATGTGATGTCAAGTAATGAAGTACCTGGAAAGGTATTGCATTCTTCCTCTGTTACAGATGCTGCAGGGGATGAAGATACTTCTGGTTCTTTGGGTAATAATTTATCTGGGGAAATGGAAGGAAAGGCGGGTGATTCACATCCATATCCCATTCTACGCCCAATAATTATTCCTAATTTATCAAGGGAAAGGTCAAGATCTGACTTTAAGCGCAGTGTTGACCATAAAAGCCCTTGTGTTCCCCCGACAAGGCGGGAGCAGCCTCGTATAAAGCGGCCACCATCACCTGTAGTGCTTTGTGTTCCACGGGCTCCACGTCCACCTCCACCGTCCCCTGTGAGTGACTCCAGGAAACAAAGGGGTTTCCCTAGTGTTAGATCTGGTAGTTCCAGCCCAAGGCATTGGGGAATGAGAGGTTGGTATCATGATGGAAGTAATTTGGATGAAGCTTGCCTAAGAATGGATGGTGCCGAAGTTGTTTGGCCGTCTTGGAGAAGCAATAATCTTGCAGTGAGATCTATGATTCAGCCTTTACCTGCAGCCCTTCTGCAGGACCGCCTGATTGCTATGTCACAGATACCACGTGACCAGGAGCATCCCGACGTGACCATTCCTTTGCAACCTCCCGAGTTACAAAGCTGTTCTGCACGGAGTTCATCTTTGTCTTTGATGCATGGCCTTCTCCATGATGAGATTGATTCTTTCTGTAAACAGGTTGCTGCAGAAAATTTGAGTAGGAGGCCTTACATTAATTGGGCTGTCAAGAGAGTTACCAGATCTCTGCAGGTTCTGTGGCCAAGATCCAGGACAAATGTATTTGGTTCAAATGCAACTGGCATGTCTCTTCCCACAAGTGATGTTGACCTTGTGGTTGTCCTCCCTCCAGTGAGGAACCTGGAACCTATTAAAGAAGCTGGAATACTTGAAGGTCGTAATGGTATCAAAGAAACATGTCTTCAGCATGCAGCTAGGTATCTTGCCAACCAGGATTGGGTTAAGAGTGACTCACTGAAGACAGTGGAAAACACAGCTATACCTATTATTATGCTTGTTGTGGAAGTACCTCAGGAGGTTATATCTTCTTCTATGGTACAATCATTAAAGGAAGAACCACACTGTACTCATAATGAACATGGTAATGACAGTCATTCTGATGCTATCCAATTAGAAGATTCATCTTTTCCTAATAGTTCTGGAATAAATTTTGATGCCTCCAAAGAGTCCAAATCAGTTCGACTTGACATCAGCTTTAAGTCACCATCACATACGGGACTCCAAACAACAGAAATGGTTAAGGCATTGACAGACCAATTTCCTGCTGCTATTCCACTTGCTTTGGTACTGAAACAATTTTTGGCAGACCGGAGCCTTGATCAGTCCTACTCTGGTGGCTTAAGTTCGTATTGTTTGGTTTTACTAATTATACGTTTTCTTCAGCATGAGCACCATCTCGGCCGGTCAATCAACCAAAGCTATGGAAGCCTTCTAATGGATTTTCTTTACTTTTTTGGGAATGTGTTTGATCCTCGACAAATGCGGATATCAGTGCAGGGAAGTGGGCTCTACATAAAAAGAGAAAGAGGTTGTAGTATTGATCCAATACACATAGATGATCCTCTTTATCCAACAAATAATGTTGGAAGGAATTGCTTCAGGATACATCAATGCATTAAGGCATTTTCAGAAGCTTATTCTGTTCTTGAGAATGAACTCACATTCCTAAACAGTGATGGCGAATCATGTTCAAAGCCACCTTACAGACTGCTTCCAAAAATCATCCCTAATCTTGATGTATCAAACTCATAA 4677 0.4392 MAHHQLIDSLTSHISLYHSHSQSQSSNPNPNPRSQILKWFSSLSLQHRQSALTIVDPTFVQTLLRMISKLRSNGHGSFIVLPDLPSTHPPFLPTLCFKRSRGLLARAADSADSAVAGRVLFDSARLFESAEGNEGAGACSCSAACLDAFTVAENLVDDIDRFVDVMDRISNGGFLRGEENEIGNNWVELNWLKAMGYYRIEAFLANRIEVAMRLAWLNSGGGGGGGGGRKRGVKLKEKMNLAGVSANVFWRKKGCVDWWSNLDAVTRKRALTTILSRAAKPLTREILEVAHNASQDEIWLYSVGVDKFLQYNRTASAQRTTTAFPNDVEFGTVVTPLAFCNKPSALARALNSLLVLLDVNMVITSVLNIDYDIGELFFSSLDSVCTVSDCILRKIRGLLMVISLDCTKFELLSEELDKSSSGRSKEKPSASNRKKKGRSRNTKKQNHVPYTCVNGISREKPQKDIDCLVDNEKKADLVGSKEPPNDHLGKEISTGSISSTAKKDHTRRLDANKLRTNSRKSRKEKNKCKNTTTGREASNFQKSIIDAASTTVIFEGEVGICDMVFDKSSIENAKNDYLNGSDIHSSSTKNSFAEAIEQENVEYLSKSCNGLGPQRCLASNQGKTMSQEIDCSACDVDCNGQNPPAHELKHGSFSSKEDTGSLNSVCVPEADVKPSVPDKLTREVHVKEFGLLKERDRCLFECRNSAFSKCSPYEWPGVPSVYFPSFNSHLPPATDRLHLDVGRNWHNHFCHSFVPTLQQARNTPIEGGRNPILSRPIPMSLDWPPVFRGGMAAPPNGNYDSGFMTRRQCTFSKGLAVHSVQVDATTPDDERKYSGDIFDLPPDIANAQELADEFDNHWVSEEEYEVHAVSGIDYNQYFGGGIMYWNSSDYPGNGFSRPPSLSSDDSLWALREADMNRAVDDMVAFSSSYSTNGLTSPTAAAFCSPFDPVGTGPQTVSYVMSSNEVPGKVLHSSSVTDAAGDEDTSGSLGNNLSGEMEGKAGDSHPYPILRPIIIPNLSRERSRSDFKRSVDHKSPCVPPTRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKQRGFPSVRSGSSSPRHWGMRGWYHDGSNLDEACLRMDGAEVVWPSWRSNNLAVRSMIQPLPAALLQDRLIAMSQIPRDQEHPDVTIPLQPPELQSCSARSSSLSLMHGLLHDEIDSFCKQVAAENLSRRPYINWAVKRVTRSLQVLWPRSRTNVFGSNATGMSLPTSDVDLVVVLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKSDSLKTVENTAIPIIMLVVEVPQEVISSSMVQSLKEEPHCTHNEHGNDSHSDAIQLEDSSFPNSSGINFDASKESKSVRLDISFKSPSHTGLQTTEMVKALTDQFPAAIPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRSINQSYGSLLMDFLYFFGNVFDPRQMRISVQGSGLYIKRERGCSIDPIHIDDPLYPTNNVGRNCFRIHQCIKAFSEAYSVLENELTFLNSDGESCSKPPYRLLPKIIPNLDVSNS* 1559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2711 1558 MobiDBLite consensus disorder prediction 975 1007 - -
Amo02g2711 1558 MobiDBLite consensus disorder prediction 1074 1088 - -
Amo02g2711 1558 SUPERFAMILY PAP/OAS1 substrate-binding domain 1396 1529 - -
Amo02g2711 1558 SUPERFAMILY Nucleotidyltransferase 1186 1390 IPR043519 -
Amo02g2711 1558 Gene3D Beta Polymerase, domain 2 1202 1319 IPR043519 -
Amo02g2711 1558 MobiDBLite consensus disorder prediction 476 533 - -
Amo02g2711 1558 MobiDBLite consensus disorder prediction 501 517 - -
Amo02g2711 1558 MobiDBLite consensus disorder prediction 1327 1347 - -
Amo02g2711 1558 MobiDBLite consensus disorder prediction 417 455 - -
Amo02g2711 1558 Pfam Cid1 family poly A polymerase 1448 1501 IPR002058 -
Amo02g2711 1558 MobiDBLite consensus disorder prediction 1327 1342 - -
Amo02g2711 1558 MobiDBLite consensus disorder prediction 977 992 - -
Amo02g2711 1558 PANTHER POLY(A) RNA POLYMERASE 672 1552 IPR045862 GO:0004652|GO:0031499|GO:0043631
Amo02g2711 1558 MobiDBLite consensus disorder prediction 1055 1071 - -
Amo02g2711 1558 Pfam Nucleotidyltransferase domain 1211 1255 IPR002934 GO:0016779
Amo02g2711 1558 Gene3D - 1358 1550 - -
Amo02g2711 1558 MobiDBLite consensus disorder prediction 429 443 - -
Amo02g2711 1558 MobiDBLite consensus disorder prediction 1020 1095 - -
Amo02g2711 1558 PANTHER NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN 672 1552 - -
Amo02g2711 1558 MobiDBLite consensus disorder prediction 1020 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2711 Amo-Chr2 84105652 84117500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2711 - - mtr:MTR_4g027425 2112.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2573 12 109612916 109624843 Amo02g2711 02 84105652 84117500 hybridization