Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2663 ATGCTAGTGATTGGACAAAGCTTGCAAGAAACAACCTTGGATGAAACTCAAAACCCAAATGGTTTTGTTGAGGTTAATGATGAAAGGCTTCATCAAAAACTGAACAACAGAATGTTGAGAATTATTTCCAACATGTTCAAACCTCAGAGACTGATTTCACATTTTTTACAGGAAAATCTTATGAATCCTTTCAAGAATGCTATTTTTTCCAAGAAGATTGATTGGTCATGTATTAGCACAACTTGCAAGCAATGGATCAAGAATCCCTTGAACATGGCACTTCTTCTATGGATAACTTGTGTCATCGTCTCCGGCGCGATTCTCTTCCTAGTTATGACAGGAATGCTAAACAGAATCCTCACCAAGAAATCCCAAAGAGATGAATGGTTTGAAGCAAACAACCAAATCCTCAATGCTCTATTCACTCTCATGTGTCTATATCAACATCCYAAGAGATTCTACCATCTTGTTCTTCTTCTTAGGTGGAAACAAGAAGACATAACAATCCTCAGAAACTTGTATTGCAAGAATGGAAATCCCAAGCCTCATGAATTTTTTCACATGATGGTTGTTATTGTGTTACTCCATGTTAATTGCTTTGCTCAATATGCATTATGCAGCCTTAATTTAGGGTTCGACCGGTCTAAAAGGCCGGCCGTTGCAGTTGGTATATGCATCTCAATCGCAATTGCTGCTCCGATTTTCACAGGACTATACTGCTTTGTTAGCCCTCTAGGCAAGGAATATGAATCTGATGAAGTATATTGTTCAACCGGTTCAAGATTACCGTCCGAAACGAGCTTTTCTTTTGCATCAAGAAATGATCATGGCCTTGTTGTTATTGAGTATGCACCTGAATGGAGAGGAGGACTATTTGATCTTAAGCAAAATCTTTCTGTTGCATACCAAACACTCTTCTGTGGTTTTTGCACTTTTGGAAGGAACATGAAAAGGCTTCACTTTGGTAACATTTATGTTCACATTTCAACTTTTTTTCTATTTTGTATGGCACCCTTTTGCATCTTTAATCTTGCTGCATTGCACATTGATGATGAGAATCTAAGAAGAATCATGGGGTTCATTGGTATATTGCTTTCAGTTTTTGGTTTACTCTATGGTGGATATTGGAGGATTCAAATGAGGAGAAGATTCAATTTGCCACCAAATAATAATAATAAACTTTGTTGTGGGAATCAAAATGTTAGTGATTGCATGCAATGGCTATTCTGTTGTTGGTGTTCTCTTGCACAAGAAGTTAGAACAGTGGAATTCTATGACATAGTTGAAGATGAATTTTCATGCAAAAGTCAGAATCATGAAATGTTCAATTCTTCTTCACTTTGGAGCAGTCCTAGTTTGTCTAATAAGGTTTGGTCTGAAGAGAAACAGAAAAATCATGTTATGGAGGCTCCAATTGCACTGAGAATTAATGTGGAAGATAATGTCATTAGAAGAACATGA 1461 0.3696 MLVIGQSLQETTLDETQNPNGFVEVNDERLHQKLNNRMLRIISNMFKPQRLISHFLQENLMNPFKNAIFSKKIDWSCISTTCKQWIKNPLNMALLLWITCVIVSGAILFLVMTGMLNRILTKKSQRDEWFEANNQILNALFTLMCLYQHPKRFYHLVLLLRWKQEDITILRNLYCKNGNPKPHEFFHMMVVIVLLHVNCFAQYALCSLNLGFDRSKRPAVAVGICISIAIAAPIFTGLYCFVSPLGKEYESDEVYCSTGSRLPSETSFSFASRNDHGLVVIEYAPEWRGGLFDLKQNLSVAYQTLFCGFCTFGRNMKRLHFGNIYVHISTFFLFCMAPFCIFNLAALHIDDENLRRIMGFIGILLSVFGLLYGGYWRIQMRRRFNLPPNNNNKLCCGNQNVSDCMQWLFCCWCSLAQEVRTVEFYDIVEDEFSCKSQNHEMFNSSSLWSSPSLSNKVWSEEKQKNHVMEAPIALRINVEDNVIRRT* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2663 486 PANTHER - 58 468 - -
Amo02g2663 486 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 286 423 IPR006461 -
Amo02g2663 486 PANTHER PLAC8 FAMILY PROTEIN-RELATED 58 468 - -
Amo02g2663 486 Pfam Protein of unknown function (DUF2985) 84 162 IPR021369 -
Amo02g2663 486 Pfam PLAC8 family 287 420 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2663 Amo-Chr2 83196996 83198456 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2663 - - aip:107625841 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2386 12 106088737 106090197 Amo02g2663 02 83196996 83198456 hybridization