LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo02g0511	ATGACCGCCGTCGAATCCCAACCCTCCCTCACCGCCATGGCCCCCACCATCCTCTCCTCCGCAGCTCCCAACCAGATTCGCTTCTTGCTCACCTCCTTGAACGAAGTCAACTTTGACTCCGTTCTCCATCAACTCTCTCAGTTTGCTGAGTTTGGAACCGTTGGATGCATTTTGCTGCTTCAGACATGCTTTGATCACTTTAATTATGTCAGGAGAGATTTGAAAGATGTGAAGTATGAGCCAATTCTTGGGGCAGTCATAAAGCACCTCCTGGACAAACCAAACTTTAGCACGGTGTTTTCGGAGTCAATGAAGAATATAGACATCAACGAAAACTTCCTAGCAAATTTTTGTAATGGACTACAGTTGTCTTTACTGGAAAAAATTACCATCAGTCTTGCATTATCTGATTCTGAAAATCCTGAAACCAGGTTATCTGGCAAGAAATTTTGCATGGCTCAGATTGAGGAATTGCATGCCAATCCTGGTGCTTTGAGTTGCCATGAACAAATTCACAATATTATCATGTTCCTCAAGCAATCAGAGGGTCTCTCCAAGCATGTAGATTCCTTTATGCAGATATTAGCATTGGTGCAGTTCAAGGACACCCCACCTTTTGTTCTGAATCCGCTGCTACCCGATGAGATGCACGAGGCTGASTTTTTGAGGAATATGGAGTTGTTCCATGATTCTGTAGAAAATGATTTTGATGCTATTTTGGCAGACATACAGAAGGAAATGAACATGGGAGATATTGTGAAGGAACTAGGCTATGGGTGCACAWTTGACGTCTCTCAGTGCAAGGAGATCTTGTCACTTTTCTTACCTTTAACYGACAGTGCCCTCTCTAAATTACTTGGTGCTATTGCTCGTACCCATGCAGGGCTGGAGGACAACMAGTGTACATTCTTAACTTTTGGTGCAGCCCTTGGATACAATAACTTGTCTGAGTTGCCACTGCCGAACTCTTGGAACATTGATGTGTTGATAGATACAATCAAGCAGCTTGCACCTCAAACCAACTGGGTACGGGTTATTGAAAATCTTGATCATGAAGGATTTTTCCTTCCTAGTGAAGAAGCATTCTGTTTTCTGATGTCTGTGTATAGACATGCCTGTAAGGAGCCGTTTCCTCTCCATGCCATCTGTGGATCTGTGTGGAAGAATACTGAGGGTCAGCTATCTTTCCTAAAATATGCTGCATCAGCACCACCGGAAGTGTTTACCTTCGCGCACTCTACAAGGCTGCTGGCATATAATGATGCGATTAATGGCCTCAAGCTTCAAAATGGACATGCTAATCATGCATKGCTGTGTCTTGACCTTCTGGATGTTCTCTGCCAGCTAGCTGAGAAGGGTCATGCCAGTTATGTTCGGTTGATACTTGATTATCCCCTGAAACACTGTCCTGAAGTCTTGCTTCTAGGGATGGCACACATTAATACTGCTTACAACCTCTTCCAACATGAAGTATCTCTAGTTGTTTTCCCCATGATACTAAAGAGTGCTGGAGGTAGTGGAATGATTCAACATCTATGGCATGCTAATCCTAATCTGGTCTTACGAGGGGTTATKGATTCCCAAAACAATGACCTGGACAGTGTTACAAGAATTGTTGACATCTGCCAGGAGCTAAAGATTCTATCATCAGTACTGGAAGTCATTCCCTCCTATTATAGTATAAGATTAGCAGCTGTTGCTTCAAGAAAAGAATTCCTTGACCTTGAGAAGTGGCTGAGTAACAACTTATCTATGTACASGGATGTCTTCTTTGAGGAGTGCCTCAAATTYGTAAAAGATATCCATTTTGGTAGATCACAGAGCTTATCTGGTAAATCTTTTCATCAGTCTGGTGCTGTTCTGAATCTTTATGCTGAGACTACTCCTACCTTCTTGAAGGTTCTGAAATCTCATACTGACTTTGTTAACTCTAGTCAACTTTCTGAGGAGCTGGAGAGGTTGCAGGTATCTATGATAGATTCAAACCCAAGACTGCAAAATGGTGCGCCTGCAGATTCRTCTACCTCTGATGWATATTCGGAKGACATTGAAWATGAAGCAAACTYGTACTTCCATMAGATGTTTTCTGATMSGTTAACCATCAATGCAATGGTGCAAATGCTTGCCCGGTTCAAGGAATCTTCTGTGAAGAGGGAGAAATCAATTTTTGATTGCATGATTGGAAACTTGTTTGAGGAGTATAAATTTTTTCCGAAATATCCTGAAAGGCAACTCAAAATTGCTGCAGTTCTCTTTGGTTCCATCATAAAGCATCACCTTGTGACTCATCTGTCTCTGGGGATTGCTCTTCGATATGTTCTTGATTCGTTACGCAAGCCTGCAGATTCAAAGATGTTTACGTTTGGAAGTCTGGCYTTGGAGCAGTTTGTGGACCGCCTTATTGAGTGGCCTCAGTATTGCAATCACATTCTGCAAATTTCCCATTTGCGCAGCACACATTCAGAAATCGTCACTTTCATTGAACAGGCTCTTGCCAGGATTTCTGCTGGTCATGCAGATGTGGAYGGGGTGAACCATGCTTCACTTATTAGTAACCATAATTCTGCACASACTATGTTAGGGCATGTGGAGCAKCTCAATGGCTCTGGTGTCATCCAGCCTGGGCAGCAACATATATCACTGCAGCTTCAACAGAGGCGTGATATTCCCTTGGATGATCGTCAYAAAGCCTCTGTTGGTTCATCCACTGATGTAAAACCGATCTTATCATCTGTAGGGCAATCTTCAGCAGTTACTCCTGCTGATACTTCTAGTAGTAATAAGCTACATAGCACTGGCAGCGCATCGTCGATGTTATCTTCTCCTGGTTTTGTTCGTCCTTCGCGAGGAGCTACTTCAACCAGTATATTTCTGTCCCTTCACTCCCTTGTGAATGATTCTGGGTTTGGATCAGCCTTGAACATTGAAACTTTGGTTGCAGCTGCTGAGAAAAGAGAAACTCCCATCGAGGCTCCAGGGTCAGAGGTTCAGGACAAGATATCATTTATAATTAATAATATATCTACTGCAAATATTGAAGCTAAAGCAAAAGAATTCACCGAAATTTTGAAAGAGCAGTACTATCCATGGTTTGCACAGTATATGGTTATGAAAAGAGCGAGCATTGAGCCAAATTTCCATGACTTGTACCTGAAATTCCTAGATAAAGTCAATTCAAAGGCTTTGAACAAAGAGATTGTGCAGGCAACCTATGAAAATTGCAAGGTTCTTTTAGGATCTGAGCTCATAAAGTCTAGTTCAGAAGAACGCTCTTTGCTTAAAAATCTGGGAAGCTGGCTTGGAAAGTTAACAATTGGGCGGAATCAGGTTTTGAGGGCTCGTGAAATAGACCCRAAATCTTTGATTATAGAGGCATATGAGAAGGGGCTGATGATAGCTGTTATCCCATTTACTTCAAAGGTCCTTGAACCATGCCAAAGCAGTCTTGCATATCAACCCCCTAATCCTTGGACGATGGGCATTCTGGGATTGCTTGCTGAGATTTATTCAATGCCAAACTTGAAAATGAACCTCAAATTTGACATAGAGGTGTTGTTCAAAAATCTTAGTGTGGATATGAAGGATGTTACGCCAACTTCTCTCCTGAAGGATCGGAAAAGAGAAATTGAAGGAAATCCTGATTTCTCCAATAAAGATGTTGGGGCGTCTCAAGCACAAATGATGTCTGATATAAAATCTAGCCTTATACAGCCAGTAAATCAAGTGGAGTTACCACTTGAAGTTACCAATCCATCTAATACTGGGGCACATCCTCATTTACTCTCTCAGTACGCTAGTCCACTTCATATTTCCACTGGAGCCTTGATGGAGGATGAAAAGGTAACACCTCTAGGCTTGTCTGATCAACTTCCATCTGCTCAAGGACTATTACAAGCAACTCCTACGCCTGTACCTTTTTCCCTTAGCCAGCTCCCATCACAGATACCTAATATTGCAACTCATCTTATTATCAATCAGAAGCTTAGTGGTTTTGGGTTGCAAATGCATTTTCAGAGGGCTGTACCTATTGCAATGGAGAGAGCTATCAAAGAGATAGTATCTAGTATTGTGCAGCGTAGTGTTTCCATAGCTACACAAACAACAAAGGAGCTTGTTTTAAAGGATTATGCCATGGAATCAGAYGAGACACGCATAGTAAATGCTGCACACCTGATGGTTGCCAGTCTGGCTGGGAGCTTAGCTCATGTTACATGCAAAGAACCTTTAAGGGCATCAATATCAAGTCAACTAAGAATTTCACTTCAGAATTTAAATATTGCAAATGAAATTTTGGAGCAAGCTGTGCAACTTGTCACCAATGATAATCTTGATCTTGGTTGTGCAGTCATTGAGCAGGCTGCTACTGATAAGGCAATAACCACCATTGATACAGAAATTAATCAACAACTTTCTATGAGAAGGAAGCATCGAGAAGGTATGGGTTCCACATTTTTTGATACAAACTTGTACACACAAAGTTCTATGGGTGTTGTGCCAGAGCCTCTTCGACCCAAGCCTGGTCAGTTGTCCCTCTCGCAGCAGCGCGTCTATGAGGACTTCGTTCGGCTTCCCTGGCAAAATCAGTCAAGTCAGAGCTCACATTCTATGTCATCTGGTCTTTCGGTTCAATCTGGAAATGCTGGTCTCGCTGGCACTAATGGTTCTGTATCAGGACAAATTAACCCTGGTTACTCTGTAAGCTCCAGCTATGAAGGAGGGGTGTCACGACCAGTAGAAGATATGTCGGAATCTAATTTGGCTCAACACTTCAGAGCTGCTGACAGTGTTTCCCAGCACAGTTTGGAGAAAGAATCAGTTGCCTCATTTCCTTCAACTGCTTCCACACCTGAGTTGCACACTGTTGATACTTCTGATGCTATGAAAGAATCTGGAGCTTCACAGCCACTAGTTTCATCAAGTGCCGTAGAGCGTCTTGGAAGTAGTTTCTTGGAGCCCACTATTTCTACAAGGGAAGCCTTGGATAAATACCAAATGGTTGCACAAAAGTTGGAGGCTTTGGTTAATAATGATGCCAAGGAAGCAGAAATACAGGGGGTCATATCCGAGGTTCCTGAGATCATACTCAGATGTGTTAGTCGAGATGAGGCAGCTTTAGCTGTAGCGCAGAAGGTATTCAAGGGCCTTTATGACAATGTATCCAACAACACTCATGTTGGTGCTCATCTTGCAATCCTGACTGCCATTCGTGATGTTTGCAAGCTTGCCGTTAAGGAGCTTACCAGCTGGGTAATTTACTCAGAAGAAGAAAGGAAATTCAACAAAGATATTACTGTAGGCCTGATCCGCAGTGAACTGCTAAATCTTACCGAGTACAATGTTCATATGGCAAAGCTCATTGATGGGGGAAGAAACAAGGCTGCTACGGAGTTTTCTATTTCTCTTCTTCAAATGCTGGTTGTTGAGGAATCGAAAGTTATTTCAGAACTTCACAATCTTGTTGATGCTTTGGCAAAGCTTGCTTCAAAGCCTGGATCCCCTGAATCGTTGCAACAGCTGATCGAGATGATCAAGAACCCTTCTGTTAATCCTGCTAGTCTATCTGTTAGTGTTCCTGCAAAGGAGGATAAGGCAAGACAATCAAGGGACAATAAGGGTCCTGGGATGCTGGCACCAAACCGGGAAGAAGTAAACATTGTAGAGTCTGTTGAACCAGATCCTGCTGGATTCCGTGAGCAGGTTTCCATGTTGTTTACAGAATGGTATCGGATATGTGAACTCCCTCCTCCGAATGATACAGCTTCTACTCACTTCATCTTACAATTACATCAAAATGGTCTCCTTAAGGGGGATGATGTAACAGATCGCTTCTTCCGGCTATTGATGGAACTAGTTGTTACACATTGCTTAAACAGTGAGGTGATTAATTCTGGGGCATTGCAATCTTCTCAACAGCTGCCAGCAATGTCATTTATTGCAATTGATATTTATGCCAAGCTTGTCTTCTCAATATTGAAGGGATCAAACAAGTCCTTTCTTCTTTCTAAGATTCTTGCGGTGACTATTCGGTTGATTCTAAAAGATGCAGAAGAGAAGAAGGCCTCTTTTAATCCAAGACCGTATTTCAGATTGTTCATTAATTTGCTTCTAGATCTTGGTTCACTTGAACCTGTTACTGATGGTGCAAATCTCCAGATTTTGATTGCTTTTGCCAATACTTTTCATGCTTTGCAGCCCCTCAAGGTTCCTGCTTTCAGTTTTGCTTGGCTTGAGTTGATAAGTCACAGGAGCTTTATGCCAAAAATGCTGACTGGTAATGGTCAAAAAGGTTGGCCTTATATCCAAAGGTTGCTTGTTGATCTCTTCCAATTTATGGAGCCTTTTCTGAGACATGCTGAACTCGGAGATCCGGTTCGTTTTCTCTATAAAGGCACTCTTAGGGTGCTATTGGTGCTACTTCATGACTTCCCTGAGTTCCTATGTGACTTTCACTTTACCTTCTGTGATGTTATTCCGCCAAGTTGCATACAGATGCGGAATATTGTTCTGAGTGCTTTTCCGCGGAGTATGAGGTTGCCAGATCCATCCACCCCCAATTTGAAGATTGATTTGCTTCAAGAAATTACTCAATCCCCAAGGATTCTTTCGGAGGTCGATGCTGCTATTAAAGCAAAGCAGATTAAGGCTGATGTGGATGAATACCTTAAGGACAAGATGCTCCTTTCACCTAATGAAGCTGCTTCTGCCGGGACACGTTACAATGTGCCATTGATCAACTCACTTGTGTTGCATGTTGGAATGCAGGCAATCCAACAACTTCAGGGACGATCTCCCCATGCTCAATCTGCGTCACCTGGTTTCCCCTTGGCTGTATTTTCTGTTGGTGCTGCATTGGATATTTTCCAGACACTAATTGTGGAATTGGACACTGAAGGGCGCTATCTTTTCTTAAATGCCGTTGCCAACCAACTACGCTACCCTAACACACACACCCACTACTTCTCCTTCATCCTTCTGTACTTGTTTGCGGAATCAAACCAGGAAATCATCCAAGAACAAATTACTAGAGTATTGTTAGAACGGCTGATCGTTAATCGTCCTCATCCTTGGGGACTGCTCATCACTTTCATTGAGCTGATCAAGAACCCGAGGTATAACTTCTGGAACCGGTCCTTCATAAGATGCGCACCAGAGATTGAGAAACTTTTTGAGTCCGTCTCTAGGTCCTGCGGCGGTCCAAAACCAGTGGATGAGAGTATGGTCTCCGGTTGGGTTTAA	7236	0.4262	MTAVESQPSLTAMAPTILSSAAPNQIRFLLTSLNEVNFDSVLHQLSQFAEFGTVGCILLLQTCFDHFNYVRRDLKDVKYEPILGAVIKHLLDKPNFSTVFSESMKNIDINENFLANFCNGLQLSLLEKITISLALSDSENPETRLSGKKFCMAQIEELHANPGALSCHEQIHNIIMFLKQSEGLSKHVDSFMQILALVQFKDTPPFVLNPLLPDEMHEAXFLRNMELFHDSVENDFDAILADIQKEMNMGDIVKELGYGCTXDVSQCKEILSLFLPLTDSALSKLLGAIARTHAGLEDNXCTFLTFGAALGYNNLSELPLPNSWNIDVLIDTIKQLAPQTNWVRVIENLDHEGFFLPSEEAFCFLMSVYRHACKEPFPLHAICGSVWKNTEGQLSFLKYAASAPPEVFTFAHSTRLLAYNDAINGLKLQNGHANHAXLCLDLLDVLCQLAEKGHASYVRLILDYPLKHCPEVLLLGMAHINTAYNLFQHEVSLVVFPMILKSAGGSGMIQHLWHANPNLVLRGVXDSQNNDLDSVTRIVDICQELKILSSVLEVIPSYYSIRLAAVASRKEFLDLEKWLSNNLSMYXDVFFEECLKFVKDIHFGRSQSLSGKSFHQSGAVLNLYAETTPTFLKVLKSHTDFVNSSQLSEELERLQVSMIDSNPRLQNGAPADSSTSDXYSXDIEXEANXYFHXMFSDXLTINAMVQMLARFKESSVKREKSIFDCMIGNLFEEYKFFPKYPERQLKIAAVLFGSIIKHHLVTHLSLGIALRYVLDSLRKPADSKMFTFGSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVTFIEQALARISAGHADVDGVNHASLISNHNSAXTMLGHVEXLNGSGVIQPGQQHISLQLQQRRDIPLDDRHKASVGSSTDVKPILSSVGQSSAVTPADTSSSNKLHSTGSASSMLSSPGFVRPSRGATSTSIFLSLHSLVNDSGFGSALNIETLVAAAEKRETPIEAPGSEVQDKISFIINNISTANIEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLSVDMKDVTPTSLLKDRKREIEGNPDFSNKDVGASQAQMMSDIKSSLIQPVNQVELPLEVTNPSNTGAHPHLLSQYASPLHISTGALMEDEKVTPLGLSDQLPSAQGLLQATPTPVPFSLSQLPSQIPNIATHLIINQKLSGFGLQMHFQRAVPIAMERAIKEIVSSIVQRSVSIATQTTKELVLKDYAMESDETRIVNAAHLMVASLAGSLAHVTCKEPLRASISSQLRISLQNLNIANEILEQAVQLVTNDNLDLGCAVIEQAATDKAITTIDTEINQQLSMRRKHREGMGSTFFDTNLYTQSSMGVVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSSGLSVQSGNAGLAGTNGSVSGQINPGYSVSSSYEGGVSRPVEDMSESNLAQHFRAADSVSQHSLEKESVASFPSTASTPELHTVDTSDAMKESGASQPLVSSSAVERLGSSFLEPTISTREALDKYQMVAQKLEALVNNDAKEAEIQGVISEVPEIILRCVSRDEAALAVAQKVFKGLYDNVSNNTHVGAHLAILTAIRDVCKLAVKELTSWVIYSEEERKFNKDITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQMLVVEESKVISELHNLVDALAKLASKPGSPESLQQLIEMIKNPSVNPASLSVSVPAKEDKARQSRDNKGPGMLAPNREEVNIVESVEPDPAGFREQVSMLFTEWYRICELPPPNDTASTHFILQLHQNGLLKGDDVTDRFFRLLMELVVTHCLNSEVINSGALQSSQQLPAMSFIAIDIYAKLVFSILKGSNKSFLLSKILAVTIRLILKDAEEKKASFNPRPYFRLFINLLLDLGSLEPVTDGANLQILIAFANTFHALQPLKVPAFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGDPVRFLYKGTLRVLLVLLHDFPEFLCDFHFTFCDVIPPSCIQMRNIVLSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILSEVDAAIKAKQIKADVDEYLKDKMLLSPNEAASAGTRYNVPLINSLVLHVGMQAIQQLQGRSPHAQSASPGFPLAVFSVGAALDIFQTLIVELDTEGRYLFLNAVANQLRYPNTHTHYFSFILLYLFAESNQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDESMVSGWV*	2412

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo02g0511	2411	PANTHER	CCR4-NOT TRANSCRIPTION COMPLEX	23	2410	IPR040398	GO:0017148\|GO:0030015
	Amo02g0511	2411	Coils	Coil	1421	1441	-	-
	Amo02g0511	2411	MobiDBLite	consensus disorder prediction	903	946	-	-
	Amo02g0511	2411	Gene3D	-	669	836	IPR038535	-
	Amo02g0511	2411	Gene3D	-	2175	2391	-	-
	Amo02g0511	2411	Pfam	CCR4-NOT transcription complex subunit 1 TTP binding domain	663	833	IPR032193	-
	Amo02g0511	2411	Pfam	CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819	1335	1477	IPR024557	-
	Amo02g0511	2411	Gene3D	-	964	1211	-	-
	Amo02g0511	2411	MobiDBLite	consensus disorder prediction	883	946	-	-
	Amo02g0511	2411	Pfam	CCR4-NOT transcription complex subunit 1 CAF1-binding domain	989	1209	IPR032191	-
	Amo02g0511	2411	MobiDBLite	consensus disorder prediction	1588	1637	-	-
	Amo02g0511	2411	Gene3D	-	1885	2174	-	-
	Amo02g0511	2411	MobiDBLite	consensus disorder prediction	1528	1572	-	-
	Amo02g0511	2411	Pfam	CCR4-NOT transcription complex subunit 1 HEAT repeat	495	636	IPR032194	-
	Amo02g0511	2411	Pfam	CCR4-Not complex component, Not1	2036	2392	IPR007196	-
	Amo02g0511	2411	MobiDBLite	consensus disorder prediction	1528	1637	-	-
	Amo02g0511	2411	MobiDBLite	consensus disorder prediction	1851	1877	-	-
	Amo02g0511	2411	PANTHER	BNACNNG58980D PROTEIN	23	2410	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo02g0511	Amo-Chr2	6342287	6360266	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo02g0511	K12604		-	gmx:100783935	4014.92

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo12g0431	12	7082781	7100874	Amo02g0511	02	6342287	6360266	hybridization