Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0324 ATGGTGGGTTTGAGTTCTAAGAGCTATGAGCTTCTATCAAAGATTGCAACAAATGAGAAACATGGAGAGAACTCTCCTTACTTTGATGGATGGAAAGCTTATGATAGAGATCCATATCACCCTACAAGAAACCCTCAAGGTGTTATTCAAATGGGTCTTGCTGAAAATCAGCTATGCTTTGATCTCATTGAGGAGTGGTTAAAGAAGAATCCCAAGGCTTCCATTTGCACTCCTGAAGGACTTCATCAATTCAGAGATATTGCCAACTTTCAAGACTATCATGGATTACCACAGTTCACAAGTGCTGTGGCAAAGTTTATGTCAAAAGTGAGAGGTGGTAGGGTCAAGTTTGATCCAAACCGTATATTGATGAGTGGAGGGGCAACAGGTGCAAATGAATTAATCATGTTCTGCTTAGCTGATCCTGGAGATGCTTTTCTTGTTCCTACCCCTTATTATGCAGCATATCCGCGCGATTTGTGTTGGCGAACCGGATTACGGTTGATTCCGGTTCATTGTGATAGCTCCAACAATTTCAAGATCACAAGAGAAGCTCTTGAATCATCATACAAAAAAGCTAAAGATGATAACATCAATGTGAAGGGTTTGATCATAACAAACCCTTCAAACCCTTTGGGAACATCTTTAGACCGTGACACATTGAAGAGTCTAGTGAATTTCACCAATGATAACAACATACATTTGGTGTGTGATGAAATCTATTCAGCCACGGTTTTTGATTCCCCACGGTTTGTAAGTGTTGCCGAAATCATTGAAGAAATGGATGACTCATCATGCAAGAAAGAACTCATTCACATAGTTTATAGCCTATCCAAGGACATGGGATTCCCCGGTTTTAGGGTTGGGATAGTTTATTCGTACAACGATATAGTCGTGAATTGCGGCCGCAAGATGTCGAGTTTTGGATTAGTCTCTTCCCAGACTCAACATATGCTGGCCGCAATGCTGTCAGACGACGAATTTGTGGACAATTTTCTTAAGGAAAGTTCTAGAAGACTGGCGAAACGACACGAATACTTCTCAAAGGGGCTAGAAGAAGTTAACATCAAAAGGTTTCCGAGCAATGCCGGATTATTCTATTGGATGAATCTGAGTTCATTGTTGAAAGAACAAAGCTTTGAAGCCGAAATGGCGCTATGGCGCGTGATCATCAACGAAGTGAAGCTCAATGTTTCTCCGGGATCATCTTTCAATTGCTTGGAACCAGGTTGGTTTAGGGTTTGTTTTGCAAACATGGATGATGAAACGGTTGAAGTTGCACTGAATAGAATAAGAGCATTTGTGATTGGGAAAGAGAAAACAACAAAGAAGAATAATAATAATAGGGCAAAGAAAAACAACAACGTTGTTGAAGTGAAAAAACGTTGGCAACAGAATCTTAGGTTAAGTTTCTCTTCATCAAGATTGTTGGATCATCATGAAACTGTTATGTCACCTCACATTTTGTCTCCACATTCACCAATTCCAGCTTCATCACCACTTGTTCAAGCAACATAA 1518 0.4018 MVGLSSKSYELLSKIATNEKHGENSPYFDGWKAYDRDPYHPTRNPQGVIQMGLAENQLCFDLIEEWLKKNPKASICTPEGLHQFRDIANFQDYHGLPQFTSAVAKFMSKVRGGRVKFDPNRILMSGGATGANELIMFCLADPGDAFLVPTPYYAAYPRDLCWRTGLRLIPVHCDSSNNFKITREALESSYKKAKDDNINVKGLIITNPSNPLGTSLDRDTLKSLVNFTNDNNIHLVCDEIYSATVFDSPRFVSVAEIIEEMDDSSCKKELIHIVYSLSKDMGFPGFRVGIVYSYNDIVVNCGRKMSSFGLVSSQTQHMLAAMLSDDEFVDNFLKESSRRLAKRHEYFSKGLEEVNIKRFPSNAGLFYWMNLSSLLKEQSFEAEMALWRVIINEVKLNVSPGSSFNCLEPGWFRVCFANMDDETVEVALNRIRAFVIGKEKTTKKNNNNRAKKNNNVVEVKKRWQQNLRLSFSSSRLLDHHETVMSPHILSPHSPIPASSPLVQAT* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0324 505 Gene3D - 71 325 IPR015421 GO:0003824
Amo02g0324 505 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 121 141 - -
Amo02g0324 505 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 302 325 - -
Amo02g0324 505 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 143 164 - -
Amo02g0324 505 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 233 256 - -
Amo02g0324 505 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 84 100 - -
Amo02g0324 505 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 270 294 - -
Amo02g0324 505 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 51 77 - -
Amo02g0324 505 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 197 221 - -
Amo02g0324 505 Pfam Aminotransferase class I and II 49 431 IPR004839 GO:0009058|GO:0030170
Amo02g0324 505 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 7 448 - -
Amo02g0324 505 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 276 289 IPR004838 GO:0003824|GO:0009058|GO:0030170
Amo02g0324 505 CDD AAT_like 89 433 - -
Amo02g0324 505 Gene3D Aspartate Aminotransferase, domain 1 37 430 IPR015422 GO:0003824
Amo02g0324 505 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 7 448 - -
Amo02g0324 505 SUPERFAMILY PLP-dependent transferases 17 435 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0324 Amo-Chr2 3983198 3988033 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0324 K20772 - gmx:100813347 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3511 14 138628029 138632710 Amo02g0324 02 3983198 3988033 PCT
Amo04g2351 04 95684175 95688670 Amo02g0324 02 3983198 3988033 PCT
Amo02g0324 02 3983198 3988033 Amo14g3511 14 138628029 138632710 PCT
Amo02g0324 02 3983198 3988033 Amo04g2351 04 95684175 95688670 PCT