Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0095 ATGTCTACTCTACTCCACTCCCACTCTGCTTCTTCCTCCGCCTTCACTCTTCCCTCCCCACGTCGTCGTTCCGCTCCAATCAATCCTCTCCCTCGATTCTCTCGCCAAAACGCCGTCAGGTGCAAGCTCATAGAGCCGTTGAAGTTCGATAATGGCAGAGCAACCAATCAAACTGAGATGCTTATTGGCGGCAGCGGAACCGCCATTCCGAGTTTTCTTGTAGCGCCCAACACGCGCGTGCAGGATTTGGTCAACAAGAATGATACCCGTCTCAGAATATTCTCCGGTACTGCAAATCCTGCTCTTGCTCAGGAAATTGCGTGCTACTTGGGGCTGCAGCTGGGGAAAATTAAGATTAAGCGTTTTGCTGATGGTGAGATATATGTTCAGCTGCAAGAGAGTGTCAGAGGGTGTGATGTGTTTCTTGTACAGCCCACATGTCCACCCGCCAATGAGAATCTTATGGAGCTACTCATAATGATTGATGCCTGCAGGAGAGCTTCAGCCAAAAATATTACTGCAGTCATTCCATATTTTGGATATGCTAGAGCTGATAGAAAGACACAAGGGCGTGAATCCATTGCAGCCAAGCTTGTAGCAAATTTAATTACTGAAGCAGGTGCAAACCGTGTTCTCGCTTGCGATCTCCATTCTGGGCAGGCCATGGGCTATTTTGATATTCCAGTTGATCATGTGTATGGACAGCCAGTTATACTTGATTACCTTGCCAGCAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCGCCTGATGTTGGTGGTGTTGCTAGAGCACGTGCTTTTGCCAAAAAATTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGACATGGGCATAATGTTGCTGAGGTGATGAATTTGATAGGTGATGTAAAAGGAAAGGTAGCCGTGATGGTAGATGACATGATTGATACAGCTGGAACCATTGCCAAAGGTGCAGCACTATTGCATCAAGAAGGGGCAAGAGAAGTCTATGCATGCAGTACACATGCTGTTTTCAGTCCTCCTGCTATAGAAAGGTTGTCAAGCGGCTTGTTTCAAGAAGTCATCATAACGAATACAATTCCAGTGGCAGAACAGAATTATTTTCCACAGCTAACTGTCCTATCAGTGGCGAACCTTCTGGGCGAGACTGTATGGCGTGTTCATGATGACTGCTCAGTGAGTAGCATATTTCTGTAA 1206 0.4602 MSTLLHSHSASSSAFTLPSPRRRSAPINPLPRFSRQNAVRCKLIEPLKFDNGRATNQTEMLIGGSGTAIPSFLVAPNTRVQDLVNKNDTRLRIFSGTANPALAQEIACYLGLQLGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQAMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACSTHAVFSPPAIERLSSGLFQEVIITNTIPVAEQNYFPQLTVLSVANLLGETVWRVHDDCSVSSIFL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0095 401 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 215 230 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Amo02g0095 401 MobiDBLite consensus disorder prediction 1 30 - -
Amo02g0095 401 TIGRFAM ribP_PPkin: ribose-phosphate diphosphokinase 92 400 IPR005946 GO:0000287|GO:0004749|GO:0009165
Amo02g0095 401 Gene3D - 234 377 IPR029057 -
Amo02g0095 401 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 91 207 IPR029099 -
Amo02g0095 401 CDD PRTases_typeI 250 362 IPR000836 -
Amo02g0095 401 MobiDBLite consensus disorder prediction 1 19 - -
Amo02g0095 401 SMART Pribosyltran_N_2 91 207 - -
Amo02g0095 401 Gene3D - 94 392 IPR029057 -
Amo02g0095 401 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 48 401 IPR005946 GO:0000287|GO:0004749|GO:0009165
Amo02g0095 401 Pfam Phosphoribosyl synthetase-associated domain 292 400 IPR005946 GO:0000287|GO:0004749|GO:0009165
Amo02g0095 401 PANTHER RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 2, CHLOROPLASTIC 48 401 - -
Amo02g0095 401 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 91 401 IPR037515 GO:0004749
Amo02g0095 401 SUPERFAMILY PRTase-like 156 392 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0095 Amo-Chr2 1090532 1095592 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0095 K00948 - gmx:100816430 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0790 19 12431939 12437725 Amo02g0095 02 1090532 1095592 hybridization