Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3362 ATGTGTCTACAGAAACGGCTACATTTAATTCAAGGTTTGCTGAAAATGAAGAAGTGGTATGGAGGCTTGTTGATCATGACTCTAGTTATGATGTTGGTTTTCCTGTACGGGTATAAAGGATTTCAGCCACAGAAACAGTCAGCAAAACAATCAGCATATAATTTCTTTCATAACCAACAGGTAGTAGATGATTATGTTAACGGTGGTAGCAGTGCTCCTCCTGTTAACTCATCTAAGGTGGAACAGAAAAGAGTACCGCTGGTACCAAGAGAAAGGCCACATTTGATTCATGTCGACGGGCTTGATGATCTGTATGGCATGAAAAATTTAACTGAAAGAGAGATGAATACTGTGATTGTATGGTCTTACTTGCATTCCTTGCTTTCGAGGTCGGATGCGCTGCCTGAAACTGCTCAAGGAGTTAAAGAAGCTTCTGTAACATGGAAAAAACTGCTGTCTATGGTTGAAGAAGACAAAGTTTCTAGGATTAATAATACAGAAAGCCCAGAAAATCAAAACTGCCCATTCTCTGTGACCACATTTGGTAAGACAATATCAGGCAGTGGAATCACTCTCGAGCTCCCTTGCGGTTTGGTTGAAGATTCTTCTATTACAATTATTGGCATCCCTAATGGGAATAGCAGCTTTCAAATTGACCTTATTGGACAAGAGCTTGAAGAGAAGCCAAATCCTCCAATCATCTTATATTACAACATAAGAGTTCCTCAAGATAACATGACTGAGGAACCATATATAGTTCAAAATACATGGACTAGTAATTTTGGGTGGGGAAAAGAGGAAAGGTGTCCTGCTCGCGGTTCTGCTAACCAGAAAGTTGATGGATTTGCTCTCTGCAATGTACAAGTCGGAAGTAACAACGAAGACAATGTAAATGTGGGTCAACCTACTAGTGATATAACTGCTAATGTTTCCTCAGAAAGTGCACATAGAACTGGTAATTTCCCCTTTGCTGAGGGGAATCCTTTCACTGCCACATTGTGGGTTGGTTCAGAGGGATTTCATATGACTGTTAATGGAAGGCATGAAACTTCTTTTGCGTACAGGGAGGTAAGAAGCTTGAACCATGGCTAG 1092 0.4066 MCLQKRLHLIQGLLKMKKWYGGLLIMTLVMMLVFLYGYKGFQPQKQSAKQSAYNFFHNQQVVDDYVNGGSSAPPVNSSKVEQKRVPLVPRERPHLIHVDGLDDLYGMKNLTEREMNTVIVWSYLHSLLSRSDALPETAQGVKEASVTWKKLLSMVEEDKVSRINNTESPENQNCPFSVTTFGKTISGSGITLELPCGLVEDSSITIIGIPNGNSSFQIDLIGQELEEKPNPPIILYYNIRVPQDNMTEEPYIVQNTWTSNFGWGKEERCPARGSANQKVDGFALCNVQVGSNNEDNVNVGQPTSDITANVSSESAHRTGNFPFAEGNPFTATLWVGSEGFHMTVNGRHETSFAYREVRSLNHG* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3362 363 SUPERFAMILY Concanavalin A-like lectins/glucanases 191 356 IPR013320 -
Amo01g3362 363 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE GALT1 104 359 - -
Amo01g3362 363 Pfam Galactoside-binding lectin 191 355 IPR001079 GO:0030246
Amo01g3362 363 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 104 359 IPR002659 GO:0006486|GO:0016020|GO:0016758
Amo01g3362 363 SMART Gal_bind_lectin_2 194 362 IPR001079 GO:0030246
Amo01g3362 363 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 190 363 IPR001079 GO:0030246
Amo01g3362 363 CDD GLECT 191 355 IPR001079 GO:0030246
Amo01g3362 363 Gene3D - 186 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3362 Amo-Chr1 106032431 106034273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g3362 16 356 Glycosyltransferase AT1G26810 35.014 1.15e-58 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3362 K20843 - gmx:100816729 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3362 01 106032431 106034273 Amo15g0578 15 36817843 36823600 PCT