Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2759 ATGGCAAGGTTTTCTATACTTGATAAAAATGGTTTTATGTTGGTTCTTTTATTATGTCTAGAAACTACTAGTATGCTCACAAATGCAGAAATATCCACAGATCTATGTCCAATATTATTTCATGCACCCACACCCATCACACTATCCAATAAATTTGCTTGTGACAATACTACCCTTACACTTGCCTCAACCGATTACGGTTTTGTGATTAACGAAAAGCCGTTAGCGGTTCTTGAACCAACTTCCACGCACGACATAACAGAACTGATAAAGCTGTCAAATTCCCTTCCTACCCCTATCCCAATAGCAGCTAGAGGGCAAGCACACTCGGTGTACGGACAAGCGATGGCGCGTGACGGGATAGTGGTGAACATGACGCATCTGAACCGTTACAGGCACGGGAAAGGGATTGTTATATTTCGCGATGAGAAGGATCCATGGAATTCTTATGCTGACGTGGGCGGGGAGCAGGTGTGGAACGATGTGTTGCATGCCGCACTGGAATATGGACTCACACCACTCTCGTTTACTGATAGTTTGGGCACTTCGGTTGCCGGAACCCTCGTCAATGCCGGAGTTGGTGGCCAAGTATTCAAATACGGCCCTCAGATCTCTAATGTTTATGAACTCGATGTTATTACTGGAAAAGGAGATCACGTGACCTGTTCTGCCAAAAAGAATTCAAAATTATTTTACGGTGTCCTTGGAGGTTTAGGACAATATGGAATAATCACTAGAGCAAGAATAGCTTTAGGTCCCGCCCCAGCAAAAGTGAAGTGGCTCCGTTTGCTTTACACTGATTTCTCTGAATTTACTAAGGACGAAGAACACTTAATTTCAGTTCATGGAAGAAGTGGCAGCAATGGATTCGATTTCGTACAAGGTTTTCTTAAGATAGAGCATTGGCCTGATGACCTTTCCTTTTATCCAATGGAAGATGTGCCTCGCATACATTCCTTAGTGTCCCAACATAACATCATTTATATCTTAGAGCTTGCTAAATATTATGATGATAGTAATCAAGCCGACATTGACGAGGACGTGGAAAATTTAATCAAGGGGTTAAAATACGTTCCTACATTTAAGTTTGAAAGGGACGTATTGTACGAGGGTTTCCTAAATAGGTACAACTTTGTTGATCACCTTCTTGCGGCACAAGGGCTTGCAGAGGCACCAAAATCTTGGTTGGATCTCTTTGTTCCAGGATCCAGAATTTCAGATATAAATGAAGGTGTATTCAAGGAAATTGTCTATAAGCAAAATATTACTGCCATTGGGATCATGTTAGTTTTTCCCATGAACAAAGCAAAATGGAATGATAAAATGGCGGTGGCAATACCCGATGAAGAAATATTCTACCTTGTGAGTCTTCTACATTATGTTTCACCCGATAAATATGAAGCATCGAGTACTCTAAAATATCAAGTATTAGATTTCTGTAAAAATTCGGGTATTGGGATCAAAGCATATCTTCCAAAAAACAAAACTCACGAAGAATGGAAGGAGCATTTTGGACATAAATGGGAAAGTTTCAAAGATGGAAAAGATGAATTTGATCCCAAAAGAATATTGGCTCCTGGACAAAGAGTTTTCAATTGA 1599 0.4046 MARFSILDKNGFMLVLLLCLETTSMLTNAEISTDLCPILFHAPTPITLSNKFACDNTTLTLASTDYGFVINEKPLAVLEPTSTHDITELIKLSNSLPTPIPIAARGQAHSVYGQAMARDGIVVNMTHLNRYRHGKGIVIFRDEKDPWNSYADVGGEQVWNDVLHAALEYGLTPLSFTDSLGTSVAGTLVNAGVGGQVFKYGPQISNVYELDVITGKGDHVTCSAKKNSKLFYGVLGGLGQYGIITRARIALGPAPAKVKWLRLLYTDFSEFTKDEEHLISVHGRSGSNGFDFVQGFLKIEHWPDDLSFYPMEDVPRIHSLVSQHNIIYILELAKYYDDSNQADIDEDVENLIKGLKYVPTFKFERDVLYEGFLNRYNFVDHLLAAQGLAEAPKSWLDLFVPGSRISDINEGVFKEIVYKQNITAIGIMLVFPMNKAKWNDKMAVAIPDEEIFYLVSLLHYVSPDKYEASSTLKYQVLDFCKNSGIGIKAYLPKNKTHEEWKEHFGHKWESFKDGKDEFDPKRILAPGQRVFN* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2759 532 PANTHER GULONOLACTONE OXIDASE 15 532 - -
Amo01g2759 532 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 15 532 - -
Amo01g2759 532 Gene3D - 125 256 IPR016169 -
Amo01g2759 532 Gene3D - 55 531 IPR016167 -
Amo01g2759 532 Gene3D - 257 490 IPR016170 -
Amo01g2759 532 Pfam FAD binding domain 74 223 IPR006094 GO:0050660
Amo01g2759 532 SUPERFAMILY FAD-binding/transporter-associated domain-like 48 253 IPR036318 GO:0050660
Amo01g2759 532 SUPERFAMILY FAD-linked oxidases, C-terminal domain 255 532 IPR016164 GO:0003824|GO:0050660
Amo01g2759 532 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 255 531 IPR015345 GO:0009690|GO:0019139|GO:0050660
Amo01g2759 532 ProSiteProfiles PCMH-type FAD-binding domain profile. 70 254 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2759 Amo-Chr1 98350928 98354500 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2759 K00279 - gmx:100816815 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2759 01 98350928 98354500 Amo03g1193 03 27700486 27704357 PCT
Amo03g1193 03 27700486 27704357 Amo01g2759 01 98350928 98354500 PCT