Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1586 ATGCAATCTTTAAGTTCTAAGGCTCTCGTGAATCTGCGTATGCCCGGTCACGGAGGGTCTGATTTCTGCGATACCGAGACCCGAGTAAGGAGACATTGGGTGAATTGCAGGAACCTGAAGAGAACGAATCGAATCGTAGCTTGTATTGCAGATAGGAATGAGAATGGCAGAGGGGAGAGTCGGAGCACGAATCGAAGCGCGAGTCCGAGCTCGTTTCTGTCTCGGAGCCACACATATGCCCTTTTAAAGCAGCAAATGGAGGTAGCAGCGAAATCCGAGGACTACAAGGAAGCTGCGAGGATTCGTGATTCGATTAAATCATTTGAAGAGGAGGAGCCAGTTTTGCGTCTGCGGAGATTAATGAAAGAAGCAATTGCTGACGAGCGGTTTGTGGATGCAGCAAAATATCGTGATGAGCTTAGAGAAATTGGTCCACACGGTCTCTTAAAATGTTCAAGTAATGCAGCAACCTTGGGAATCAGGGTTCAAGTTAAAAGTGTATATATAGAGGGTAGAAGTCAGCCTTCAAAGGGGCTTTACTTTTTTGCATACAGAATCAGAATTACGAACAACTCTGACCGCCCTGTTCAACTTCTTAGAAGGCATTGGATTATAACAGATGCAAATGGGAAGACAGAACATGTCTGGGGGATGGGGGTTGTTGGTGAACAGCCTGTAATGCTTCCCAGGGCTAGCTTTGAATACACTTCAGCATGTCCAATAAGCACACCAAATGGTAGAATGGAAGGTGACTTTGAGATGATACATGTTGACAGAATAGGTTCATCATCATTTAACGTGGCTATTGCTCCCTTCTCTCTCTCTCTACTTGGAGATGATGATGGTCATTGTATTTGA 858 0.451 MQSLSSKALVNLRMPGHGGSDFCDTETRVRRHWVNCRNLKRTNRIVACIADRNENGRGESRSTNRSASPSSFLSRSHTYALLKQQMEVAAKSEDYKEAARIRDSIKSFEEEEPVLRLRRLMKEAIADERFVDAAKYRDELREIGPHGLLKCSSNAATLGIRVQVKSVYIEGRSQPSKGLYFFAYRIRITNNSDRPVQLLRRHWIITDANGKTEHVWGMGVVGEQPVMLPRASFEYTSACPISTPNGRMEGDFEMIHVDRIGSSSFNVAIAPFSLSLLGDDDGHCI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1586 285 ProSiteProfiles UVR domain profile. 111 146 IPR001943 GO:0005515
Alju13g1586 285 ProSiteProfiles UVR domain profile. 76 111 IPR001943 GO:0005515
Alju13g1586 285 PANTHER OS05G0170800 PROTEIN 35 281 - -
Alju13g1586 285 Gene3D ApaG domain 150 282 IPR036767 -
Alju13g1586 285 Pfam UvrB/uvrC motif 116 143 IPR001943 GO:0005515
Alju13g1586 285 Pfam UvrB/uvrC motif 82 110 IPR001943 GO:0005515
Alju13g1586 285 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 78 110 IPR036876 -
Alju13g1586 285 ProSiteProfiles ApaG domain profile. 154 281 IPR007474 -
Alju13g1586 285 Pfam ApaG domain 172 255 IPR007474 -
Alju13g1586 285 SUPERFAMILY ApaG-like 156 275 IPR036767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1586 Alju-ChrAlju13 34167754 34170154 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2542 06 52450738 52452924 Alju13g1586 13 34167754 34170154 CCT
Alju13g1586 13 34167754 34170154 Alju13g1586 13 34167754 34170154 ECH