Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2542 ATGCATTTATTAAGCGTTCAGAGTTTCTTGGATTCGGGGGTTCTGGTTCCCGGAAGCTCGGGGTTCGGAGTGCAGTGGGTGGATTCCAGAAACATCAGGATAAGAAATAGGATCGCCATAGTTTGTGCTGCTGCAGAAAGGGATGGGAATGGTCCAAGAGAGGGTCGAAGTATGAGTCGGAGTTCGAGTCAGAAGCAGAAGCTGAGTCAAAATCCGATGAGTTCGATTCCTTCTTTACCCCACTCCTACGCCCTCTTGAAGCAGCAATTGGAAGTAGCTGCGAGATGCGAGGATTACAAAGAAGCTGCAAGGATTCGAGATTCGCTAAAATTGTTCGAGGAGGAGGAGCCAGTTCTGCGTCTGCGAAGATTGATGAAGGAAGCGATTGCTGATGAAAGGTTTGAGGATGCAGCTAGATACCGAGATGAGCTAAAAGTTATTGCCCCTCACTCTCTATTAAAATGTTCCAGTGATGCCACAACCTTCGGAATAAGGGTTCAAGTTAGGAGTGCTTATATAGAGGGCAGAAGCCAACCTTCGCAACGGATATACTTCTTTGCATACAGAATAAGAATTACCAATAATTCAGACCGCCCCATTCAACTTTTTAGAAGGCATTGGATTATAACTGATGCTAATGGGAACACAGAGAACGTGTGGGGGATCGGAGATGTTGGTGAACAACCAGTTATGCTTCCACGGACCAGTTTTGAGTACTCTTCAGGATACTCATTGCACACCCCGAGTGGTAGAATGGAAGGAGACTTTGAGATGATCTACGTGGATAGAATAGGCTCATCCCCATCATTTAATGTGGCAATTGCTCCCTTTTCACTCTCTCTTCTGGGAGATGATGACGGTGATACCATTTGA 873 0.4593 MHLLSVQSFLDSGVLVPGSSGFGVQWVDSRNIRIRNRIAIVCAAAERDGNGPREGRSMSRSSSQKQKLSQNPMSSIPSLPHSYALLKQQLEVAARCEDYKEAARIRDSLKLFEEEEPVLRLRRLMKEAIADERFEDAARYRDELKVIAPHSLLKCSSDATTFGIRVQVRSAYIEGRSQPSQRIYFFAYRIRITNNSDRPIQLFRRHWIITDANGNTENVWGIGDVGEQPVMLPRTSFEYSSGYSLHTPSGRMEGDFEMIYVDRIGSSPSFNVAIAPFSLSLLGDDDGDTI 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2542 290 Gene3D ApaG domain 154 285 IPR036767 -
Alju06g2542 290 Pfam UvrB/uvrC motif 120 147 IPR001943 GO:0005515
Alju06g2542 290 ProSiteProfiles UVR domain profile. 115 150 IPR001943 GO:0005515
Alju06g2542 290 MobiDBLite consensus disorder prediction 55 74 - -
Alju06g2542 290 SUPERFAMILY ApaG-like 160 280 IPR036767 -
Alju06g2542 290 ProSiteProfiles ApaG domain profile. 158 286 IPR007474 -
Alju06g2542 290 MobiDBLite consensus disorder prediction 48 74 - -
Alju06g2542 290 PANTHER OS05G0170800 PROTEIN 35 286 - -
Alju06g2542 290 Pfam ApaG domain 176 259 IPR007474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2542 Alju-ChrAlju06 52450738 52452924 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2542 06 52450738 52452924 Alju13g1586 13 34167754 34170154 CCT
Alju06g2542 06 52450738 52452924 Alju06g2542 06 52450738 52452924 ECH