Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1582 ATGTTGAGGCTGGCTTCAAAGAGAATTTTGGGAGTGTCACGGGAGGTGCCACGTCCGACACTCCAAGTTCTGCCTCAATTCTCCCTTGAGAAGGTTGATCACTACAACAACCCACAGAATGTCGGATCCTTCAACAAGAATGACCCCATGGTCAGTATGGGCTTGGCCAAGGCACCCGCTTGTGGGGATGGCATGAAACTCCATATTAATAGTGATGCAAAGTCCAGAAAGATTGTTGATGCTCGCTTCCAGACCTTTGGCTGTGGTTTGGGTGTTGCCTCTTCTTCTTCGGGGAAGCAAATGGAGGGAGTTTCATCCATCAAAAACATAGAAATTGTAAAGCACCTGTCATCTCAACCATTTAAGCTTCACCGCCTCATGTTTGCTGAGGATGCCATCAAAGCAGGTGTTAAAAGGTATGAAGCTAAGCGAGGCTTGGCAACAGCCACTGAGGCAACATCTGGAGAGACAGCCGCCACTCCAGTCATGGCGCCTGTGAAAAATAGACTTCGCCCGATATCTCCTCATCTTTCTATTTATAAGCCCCAGTCCTCTTCCATGACTTCAATTTTTAATAGAATCTCGGGTGCTACCCTAGCAGCTATGGTTTTGGGGTTTTACCTTCTCTGTATGAAAATGCCTCTGATTTGCTTCTCCTTCGCTGAATTCTACCAATTTTTCCATTTCTCAGCAAATTTCAGTGTAATCTGTGCCCAGATTGCTGCAGTTGCCATGTCCTATCATTTGTATGATGGGATCAAGAGATTACTGCATTAG 777 0.4595 MLRLASKRILGVSREVPRPTLQVLPQFSLEKVDHYNNPQNVGSFNKNDPMVSMGLAKAPACGDGMKLHINSDAKSRKIVDARFQTFGCGLGVASSSSGKQMEGVSSIKNIEIVKHLSSQPFKLHRLMFAEDAIKAGVKRYEAKRGLATATEATSGETAATPVMAPVKNRLRPISPHLSIYKPQSSSMTSIFNRISGATLAAMVLGFYLLCMKMPLICFSFAEFYQFFHFSANFSVICAQIAAVAMSYHLYDGIKRLLH 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1582 258 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 168 257 IPR000701 GO:0016627
Alju13g1582 258 SUPERFAMILY SufE/NifU 33 146 - -
Alju13g1582 258 Pfam NifU-like N terminal domain 32 144 IPR002871 GO:0005506|GO:0016226|GO:0051536
Alju13g1582 258 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 163 257 IPR034804 GO:0016020
Alju13g1582 258 CDD SQR_TypeC_SdhC 171 257 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Alju13g1582 258 CDD IscU_like 33 135 IPR002871 GO:0005506|GO:0016226|GO:0051536
Alju13g1582 258 Gene3D - 28 151 - -
Alju13g1582 258 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 156 258 IPR034804 GO:0016020
Alju13g1582 258 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 26 152 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1582 Alju-ChrAlju13 34086521 34094545 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2548 06 52485900 52487309 Alju13g1582 13 34086521 34094545 CCT
Alju13g1582 13 34086521 34094545 Alju13g1582 13 34086521 34094545 ECH