Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2548 ATGCTAAGGCTCGCTTCCAAGAGACTTATCGGAATCGCGTCGCGGTCGGCGCCGACGTCCCAGTTTCTGCCTCGGTTTTACCACGAGAGGGTTGTTGATCACTACAACAATCCCCGGAATGTTGGATCCTTTGAGAAGAATGACCCCAGCGTCGGTACGGGGTTGGTCGGTGCACCTGCTTGTGGCGATGTTATGAAGCTTCAGATTAAGGTTGATGAAGAGACCGGTAAAATTGTTGATGCTTGCTTCAAGACCTTCGGCTGTGGCTCTGCCATTGCCTCTTCCTCTCTAGCTACTGAATGGGTAAAGGGAAAGCAAACGGAAGAAGCTCTTTCCATTAAAAACTCGGAAATTGCAAAGCATCTTTCACTGCCGCCAGTTAAGCTTCACTGCAGCATGCTCGCTGAGGATGCCATTAAAGCCGCTGTGAAAGACTATGAAACTAGGCGTGCTAATGGAAATGGTAGTGAAGATTCAGCTTCTGGAGTGAAGGCTGCCTCTGCTTGA 507 0.497 MLRLASKRLIGIASRSAPTSQFLPRFYHERVVDHYNNPRNVGSFEKNDPSVGTGLVGAPACGDVMKLQIKVDEETGKIVDACFKTFGCGSAIASSSLATEWVKGKQTEEALSIKNSEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYETRRANGNGSEDSASGVKAASA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2548 168 SUPERFAMILY SufE/NifU 26 151 - -
Alju06g2548 168 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 15 157 IPR002871 GO:0005506|GO:0016226|GO:0051536
Alju06g2548 168 FunFam Iron-sulfur cluster assembly protein 27 166 - -
Alju06g2548 168 Gene3D - 26 166 - -
Alju06g2548 168 MobiDBLite consensus disorder prediction 149 168 - -
Alju06g2548 168 Pfam NifU-like N terminal domain 27 151 IPR002871 GO:0005506|GO:0016226|GO:0051536
Alju06g2548 168 NCBIfam Fe-S cluster assembly scaffold IscU 27 150 IPR011339 GO:0005506|GO:0016226|GO:0051536
Alju06g2548 168 CDD IscU_like 27 142 IPR002871 GO:0005506|GO:0016226|GO:0051536
Alju06g2548 168 MobiDBLite consensus disorder prediction 153 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2548 Alju-ChrAlju06 52485900 52487309 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2548 06 52485900 52487309 Alju13g1582 13 34086521 34094545 CCT