Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1566 ATGCCAGGAATCCTTACAAATGGGATTGTTGAACATAATGAAAGAGCAAATGAAATGAACGGAAATCATTCCCCTTGTAAGGAATCTGCTACTCCAATCAAGCCCCAAAGGAGTTCCTTTAGTCCACAAAGTCCTCATAACATAGGTCCAGATGTACCTGTTCTACCGGTTGACACCTCAATTGAGCAGCTTTATGAAAATGTCTGTGACATGGAAAGTTCTGATCACTCATCTTCCAGACAAAGTCTCGGATCTGATGGCGATGAGTCTAGGATCGATTCAGAATTGTGCGATCTAGTTGGAGGACCAATGAGGGAAGTGGAAATCATGGAAGACGAAGTGGCAGAGAGTTCGGGAGGTGATTTCATAACATCAGCAAATGGTGAGAAGTTAAAACAGGCAGATGAGAAGATTCAATGTCAGGAGTTGGTACAAGCCGATGAGAAGATTCAATCTGAGAAGTTGGTACAGGAGGAAGAGAAGGTTCAATCTGCTAGTGCAAGTTCTACTTCTGCAGAAAATTCAAACAAAGTGCCAAACTCACAGGCGGACCTTATCCCTGAAACACCACCAGAGTCGAAATCCAAGGTAAAGAGTCCTCCCACAAAGCCTCCTACTGATAAGAGGAATGATAAACCTCGGAGAAAACAAAATAATGGAGCTGCTCGTGTGAAAAAATCGAAGAATTCTCCTATTAGAAGGTTAAAATCACAAAATCAGCGTGAGAATTCCACTGAATCTACTACATCAGACAAGCCAGAGATGGGGCCAGTTTTACTAAAGCAAGCAAGAGATGTGATTTCAACAGGAGATAATCCAAGGCTGGCTCTTGAATTAGCTCTGCGAGCAATGAGATTATTTGAGAAGTACGCTGATGGAAAACCAAGTTTGGAACTGGTTATGTGCCTGCATGTTACCGCGGCAATATATTCCAGCTTGGGCCAATACCATGAGGCAATCCCACTTCTTGAGCACTCCATTGAAATTCCTCTCATTGAGGAAGGCCAGGATCACTCCCTCGCCAAGTTTGCTGGTCACATGCAATTAGGTGACACCTTTGCAATGTTGGGCCAGCTTGAAAATTCAATTACGTGCTACACCACAGGGTTGGAAGTCCAGAGGCAAGTCTTAGGAGAAACAGACCCAAGATTTGGTGAAACTTGTAGGTATGTAGCTGAAGCACACGTTCAAGCGTTGCAATTTGACGAAGCTGAGAGGCTTTGCCAAATGGCTCTTGACATTCATAGAGCAAACGGCTCGCCTCCTTCTCTTGAAGAGGCGGCTGATAGGAGGCTCATGGGACTCATATGTGAAACAAAAGGAAACCATGAAGCAGCTCTTGAGCATCTAATTTTAGCCAGCATGGCAATGGTAGCCAATGGTCAGGAAGTGGAAGTGGCATCTGTTGACAGCAGTATTGGAGACACATACTTATCTTTGTCTCGGTATGATGAAGCTATTTTTGCTTATCAGAAAGCACTCACAGTTTTTAAGACCAGCAAAGGAGAGAATCATCCGGCCGTGGGATCAATCTTTGTACGCCTGGCTGACTTGTATAACAGGACAGGGAAGATAAGGGAATCAAAATCTTACTGCGAGAGTGCAAGTAGAATCTATGAGAAACCTATGCCTGGGGTTCCTCCTGAGGAGATTGCAAGTGGTCTTATGGATATTTCAGCTATCTATGAGTCAATGAATGAGCTTGATCAGGCACTCAAGTTACTTCCCAAGGCACTGGAGATATATAAGGATGCCCCGGGTCGGCAAAGCACGGTAGCAGGAATTGAAGCACAGATGGGAGTCTTGCACTACATGTTGGGAAACTATTCTGAATCTTACAACACTCTAAAGAACGCTATCTCAAAGCTTCGTGCTACTGGAGAGAAGAAATCAGCTTTCTTCGCCGTCGCTCTTAACCAAATGGGACTTGCTTGTGTGCAGCGCTACACATTGGGCGAGGCCACAGAACTGTTTGAAGAAGCAAAGAATATATTGGAACAAGTGTATGGACCCTATCACCATGAAACTCTTGGGGTGTATAGCAATCTTGCTGGCACCTATGATGCAATAGGCAGGGTGGATGAGGCAATTCAGATTCTGGAGTATGTAGTGGGAATGAGGGAGGAAAAACTTGGGACGGCGAATCCTGATGTGGATGATGAGAAAAGAAGGCTGAGTGAATTGTTGAAGGAAACTGGTAGAGTTAGGAGCAGAGCAGCCAGATCACTTGAGAACCTTCTTGATGCTAATGCTCCTTCTAAAAAACAGTAA 2271 0.4447 MPGILTNGIVEHNERANEMNGNHSPCKESATPIKPQRSSFSPQSPHNIGPDVPVLPVDTSIEQLYENVCDMESSDHSSSRQSLGSDGDESRIDSELCDLVGGPMREVEIMEDEVAESSGGDFITSANGEKLKQADEKIQCQELVQADEKIQSEKLVQEEEKVQSASASSTSAENSNKVPNSQADLIPETPPESKSKVKSPPTKPPTDKRNDKPRRKQNNGAARVKKSKNSPIRRLKSQNQRENSTESTTSDKPEMGPVLLKQARDVISTGDNPRLALELALRAMRLFEKYADGKPSLELVMCLHVTAAIYSSLGQYHEAIPLLEHSIEIPLIEEGQDHSLAKFAGHMQLGDTFAMLGQLENSITCYTTGLEVQRQVLGETDPRFGETCRYVAEAHVQALQFDEAERLCQMALDIHRANGSPPSLEEAADRRLMGLICETKGNHEAALEHLILASMAMVANGQEVEVASVDSSIGDTYLSLSRYDEAIFAYQKALTVFKTSKGENHPAVGSIFVRLADLYNRTGKIRESKSYCESASRIYEKPMPGVPPEEIASGLMDISAIYESMNELDQALKLLPKALEIYKDAPGRQSTVAGIEAQMGVLHYMLGNYSESYNTLKNAISKLRATGEKKSAFFAVALNQMGLACVQRYTLGEATELFEEAKNILEQVYGPYHHETLGVYSNLAGTYDAIGRVDEAIQILEYVVGMREEKLGTANPDVDDEKRRLSELLKETGRVRSRAARSLENLLDANAPSKKQ 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1566 756 Pfam Tetratricopeptide repeat 635 703 - -
Alju13g1566 756 Pfam Tetratricopeptide repeat 466 541 - -
Alju13g1566 756 MobiDBLite consensus disorder prediction 1 96 - -
Alju13g1566 756 MobiDBLite consensus disorder prediction 19 46 - -
Alju13g1566 756 MobiDBLite consensus disorder prediction 151 257 - -
Alju13g1566 756 Pfam Tetratricopeptide repeat 307 330 IPR019734 GO:0005515
Alju13g1566 756 ProSiteProfiles TPR repeat profile. 467 500 IPR019734 GO:0005515
Alju13g1566 756 SMART tpr_5 509 542 IPR019734 GO:0005515
Alju13g1566 756 SMART tpr_5 427 460 IPR019734 GO:0005515
Alju13g1566 756 SMART tpr_5 467 500 IPR019734 GO:0005515
Alju13g1566 756 SMART tpr_5 635 668 IPR019734 GO:0005515
Alju13g1566 756 SMART tpr_5 677 710 IPR019734 GO:0005515
Alju13g1566 756 SMART tpr_5 552 585 IPR019734 GO:0005515
Alju13g1566 756 SMART tpr_5 385 418 IPR019734 GO:0005515
Alju13g1566 756 SMART tpr_5 300 333 IPR019734 GO:0005515
Alju13g1566 756 SMART tpr_5 343 376 IPR019734 GO:0005515
Alju13g1566 756 SMART tpr_5 593 626 IPR019734 GO:0005515
Alju13g1566 756 MobiDBLite consensus disorder prediction 233 252 - -
Alju13g1566 756 MobiDBLite consensus disorder prediction 66 85 - -
Alju13g1566 756 ProSiteProfiles TPR repeat profile. 552 585 IPR019734 GO:0005515
Alju13g1566 756 Gene3D Tetratricopeptide repeat domain 628 749 IPR011990 GO:0005515
Alju13g1566 756 Gene3D Tetratricopeptide repeat domain 455 627 IPR011990 GO:0005515
Alju13g1566 756 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 56 750 - -
Alju13g1566 756 Gene3D Tetratricopeptide repeat domain 237 454 IPR011990 GO:0005515
Alju13g1566 756 MobiDBLite consensus disorder prediction 201 218 - -
Alju13g1566 756 MobiDBLite consensus disorder prediction 161 188 - -
Alju13g1566 756 SUPERFAMILY TPR-like 592 734 IPR011990 GO:0005515
Alju13g1566 756 Pfam Tetratricopeptide repeat 555 588 - -
Alju13g1566 756 SUPERFAMILY TPR-like 302 621 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1566 Alju-ChrAlju13 33907060 33909525 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2558 06 52597438 52600013 Alju13g1566 13 33907060 33909525 CCT
Alju06g2558 06 52597438 52600013 Alju13g1566 13 33907060 33909525 ECH
Alju13g1566 13 33907060 33909525 Alju13g1566 13 33907060 33909525 ECH