Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2558 ATGCCGGGAATGGCTGATAATGGAGTTACTGTTGAGAGGGAGGCAAACGAGAGGAATATAAATCCTTCCTCTTCTAAATCTAAGGAGGCCTCAACCCCAATTGAGTCACAACATCCTGAGAGTACAGGTGTTGCTGGTGCTGTTGATCCCTCTATTGACCAGCTTTATGAAAATGTGTATGACATGCAAAGTTCTGATCAGTCACCTTCGAGGCAAAGTTTTGGATCTGATGGTGATGAGTCTAGGATTGATTCAGAATTGCATCATCTAGTTGGAGGGCAAATGAGGGAGGTGGAGATAATGGAAGAGGAAATGGAGGAAAAGCAAGGTGGTGATGGAATTAGTGAAACATCTTCTAGAAAGGGTAGTTTGTCTAATGATAGGAAGGTGGATAATGTGGATGAGATTCAACCTGCAAGTACAAGTTCTGTCACTTCTGAAAAACCAAACAAGCCATCCAATGCAAGATTACAATCCAAGACAGTGTTAAAATCAAAACCCAATGTCAAAAGTCCTCTTGTGAAGCCTTCTTTTGAGAAAAAGAACGATAAGCCTTTGAAAAAACAAGGCACAGGAGTTGTTAGCTTGAAGAAATCACAAATTGCTCCTCCTGGAAGGTCAGTGTCACAGAGTCGTGCCAAGAATATAGCTGAACCAGCATCGGATAAGCCGGAGATGGGACCAATTTTGCTTAAGCAGGCAGCGGATCAGATGTCATCAGGGGATAATCCACATAAGGCTCTTGAATTAGCTCTTCAAGCTACCGAAGTGTTTGAGAAGTATGCTGGTGAGAAACCAAGTTTGGAGCTTGTTATGAGCTTACATGTTGCAGCAGCAATATATTGTAGCTTGGGTCAATACAATGATGCGATTCCAGTTCTCCTGCGCTCTATTGCGATTCCTGATATTGAGGAAGGGGAGGACCATGCACTGGGTAAATTTGCTGGTCTGATGCAACTGGGTGACACCTATGCAATGCTGGGCCAGCTTGAGAATGCAATTACGTACTACACCAAAGGTTTGGAAGTGCAGAAACAGATTTTGGGAGAAACAGATCAGAGAGTTGGTGAAACTTGTCGGTATCTGGCTGAAGCTCATGTTCAAGCATTGCAGTTTGATGAGGCTGAGAGGCTCTGCCAAATGGCTTTGGACATTCATAGAGCGAGAGATTCACCTCCTTCTCTTGAAGAGGCAGCTGATAGGAGGCTCATGGGCCTTATATGTGAAACAAAGGGAAAGCATGAAGCTGCGCTAGAGCATCTTGTTTTAGCAAGCATGGCAATGGTAGCAAATGGACAAGAAGGGGAAGTGGCATCTGTTGATTGTAGTATTGGAGACACTTATCTATCCTTGTCTCGATATGATGAGGCTGTTTTTGCTTACCAAAAGGCTCTAACAGCCTTCAAGGCCAGCAAAGGAGAGAATCATCCAGCCGTGGCTTTGGTTTTTGTACGTTTAGCTGACTTGTATAAGAGGACAGGGAAGATAAAGGAATCCAAATCTTACTGTGACAGTGCACTTAAAATCTATGAGAAGCCTCTTCCCGGGGTCCTTCTCGAGGATATTGCAAGTGGTCTCACTGATGTTGCTGCTATCTATGAGTCAATGAATGAACATGAACATGCACTCAATTTACTGAAGAAGGCATTGGGTATATATAACAATGCCCCTGGTCAGCAAAGCACAATAGCAGGAATTGAAGCTCAGATGGGAGTATTGTACTACATTGTAGGGGACTATACAGAATCTTACAATGCATTTAAGAGTGGTATCACAAAGCTTCGTGCTATGGGAGAGAAGAAATCAGCCTTCTTTGGCGTTGCTCTTAATCAAATGGGACTTTCCTGCGTGCAGCGTTACGCCCTCACTGAGGCTGCAGAATTGTTTGAAGAGTCCAAGAGTATTTTGGAACAAGAGTATGGACCATATCACCCTGAAACACTTGGCGTATGTAGCAATCTTGCCGGCACATATGATGCACTTGGCAGGTTGGATGATGCAATTGAAATTCTGGAGTACGTTGTTAGTTTAAGGGAGGAAAAACTTGGGACTGCCAATCCTGATGTTTATGATGAGAAGAGAAGGTTGAGTGAATTGTTGAAGGAAGCAGGTAGAGTTCGCAACAGAAAATCAGTATCACTGGAGCGCCTTCTTGATTCCAATGTTTATGCTCTAAACAATTTTGTCATGAGGATGGCTAGCTAG 2205 0.4354 MPGMADNGVTVEREANERNINPSSSKSKEASTPIESQHPESTGVAGAVDPSIDQLYENVYDMQSSDQSPSRQSFGSDGDESRIDSELHHLVGGQMREVEIMEEEMEEKQGGDGISETSSRKGSLSNDRKVDNVDEIQPASTSSVTSEKPNKPSNARLQSKTVLKSKPNVKSPLVKPSFEKKNDKPLKKQGTGVVSLKKSQIAPPGRSVSQSRAKNIAEPASDKPEMGPILLKQAADQMSSGDNPHKALELALQATEVFEKYAGEKPSLELVMSLHVAAAIYCSLGQYNDAIPVLLRSIAIPDIEEGEDHALGKFAGLMQLGDTYAMLGQLENAITYYTKGLEVQKQILGETDQRVGETCRYLAEAHVQALQFDEAERLCQMALDIHRARDSPPSLEEAADRRLMGLICETKGKHEAALEHLVLASMAMVANGQEGEVASVDCSIGDTYLSLSRYDEAVFAYQKALTAFKASKGENHPAVALVFVRLADLYKRTGKIKESKSYCDSALKIYEKPLPGVLLEDIASGLTDVAAIYESMNEHEHALNLLKKALGIYNNAPGQQSTIAGIEAQMGVLYYIVGDYTESYNAFKSGITKLRAMGEKKSAFFGVALNQMGLSCVQRYALTEAAELFEESKSILEQEYGPYHPETLGVCSNLAGTYDALGRLDDAIEILEYVVSLREEKLGTANPDVYDEKRRLSELLKEAGRVRNRKSVSLERLLDSNVYALNNFVMRMAS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2558 734 MobiDBLite consensus disorder prediction 202 216 - -
Alju06g2558 734 Gene3D Tetratricopeptide repeat domain 221 315 IPR011990 GO:0005515
Alju06g2558 734 SUPERFAMILY TPR-like 316 421 IPR011990 GO:0005515
Alju06g2558 734 SUPERFAMILY TPR-like 228 344 IPR011990 GO:0005515
Alju06g2558 734 MobiDBLite consensus disorder prediction 57 76 - -
Alju06g2558 734 Pfam Tetratricopeptide repeat 608 679 - -
Alju06g2558 734 Pfam Tetratricopeptide repeat 437 512 - -
Alju06g2558 734 ProSiteProfiles TPR repeat profile. 314 347 IPR019734 GO:0005515
Alju06g2558 734 MobiDBLite consensus disorder prediction 1 224 - -
Alju06g2558 734 Gene3D Tetratricopeptide repeat domain 316 424 IPR011990 GO:0005515
Alju06g2558 734 Gene3D Tetratricopeptide repeat domain 425 603 IPR011990 GO:0005515
Alju06g2558 734 ProSiteProfiles TPR repeat profile. 438 471 IPR019734 GO:0005515
Alju06g2558 734 SUPERFAMILY TPR-like 563 706 IPR011990 GO:0005515
Alju06g2558 734 MobiDBLite consensus disorder prediction 77 114 - -
Alju06g2558 734 Gene3D Tetratricopeptide repeat domain 605 719 IPR011990 GO:0005515
Alju06g2558 734 SUPERFAMILY TPR-like 436 555 IPR011990 GO:0005515
Alju06g2558 734 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 37 721 - -
Alju06g2558 734 MobiDBLite consensus disorder prediction 14 39 - -
Alju06g2558 734 MobiDBLite consensus disorder prediction 135 166 - -
Alju06g2558 734 Pfam MalT-like TPR region 278 389 IPR041617 -
Alju06g2558 734 SMART tpr_5 523 556 IPR019734 GO:0005515
Alju06g2558 734 SMART tpr_5 271 304 IPR019734 GO:0005515
Alju06g2558 734 SMART tpr_5 356 389 IPR019734 GO:0005515
Alju06g2558 734 SMART tpr_5 314 347 IPR019734 GO:0005515
Alju06g2558 734 SMART tpr_5 648 681 IPR019734 GO:0005515
Alju06g2558 734 SMART tpr_5 480 513 IPR019734 GO:0005515
Alju06g2558 734 SMART tpr_5 438 471 IPR019734 GO:0005515
Alju06g2558 734 SMART tpr_5 564 597 IPR019734 GO:0005515
Alju06g2558 734 SMART tpr_5 606 639 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2558 Alju-ChrAlju06 52597438 52600013 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2558 06 52597438 52600013 Alju13g1566 13 33907060 33909525 CCT
Alju06g2558 06 52597438 52600013 Alju13g1566 13 33907060 33909525 ECH
Alju06g2558 06 52597438 52600013 Alju06g2558 06 52597438 52600013 ECH