Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g0937 ATGTCTGTTTCTATGAGAGATTTGGATCCAGCTTTCCAGGGAGCTGGACAAAAGGCGTATCCTAAATCTAATAAGGATATTGTGCTTGGACTTGAAATATGGCGCATTGAGAATTTAAAACCAGTTGCTGTTCCCACCTCCTCCCATGGGAAGTTTTTCACTGGGGATTCCTACGTGATCTTGAAGACAACAGCTTCAAAAAGTGGCGCACTGCGTTATGATATCCATTACTGGCTGGGAAAAGACACCAGTCAGGATGAAGCTGGTGTTGCAGCCATCAAAACAATTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGCGAATCACAGGGTCATGAAACCAAAAAGTTATTGTCTTATTTCAGACCATGTATAATTCCTCAAGAAGGTGGAGTTGCCACTGGTTTTAAACATGTTGAGGCTGAAGAACATACAACACGTTTGTATGTTCCTTTTGCAAGATCAACACTCAACCATGATGATGTTTTTATTCTGGATACCCAATCTAAAATATTTCAATTCAATGGTTCTAATTCATCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTCTACAGTATATAAAGGATAACTACCATGATGGGAAATGTGAGATTGCCTCTGTTGAGGATGGAAGGTTGATGGCTGATGCTGATGCTGGAGAATTTTGGGCCTTCTTTGGCGGCTTCGCTCCTCTTCCACGGAAAACGGCCAGTGATGATGATAATACTGTTGATTCTCATTCTCCAAAGCTGCTGTGTATTGTGAAGGGGAAGGCAGAAGCTATTGAGAGTGATTCTTTGACAAGAGAACTACTAGACACAAACAAATGTTATATTCTTGATTGTGGTTTGGAAGTTTTTGTTTGGACGGGAAGAAACACCTCTCTGGATGAAAGAAAAAGTGCAAGTGCAGCTGCAGAAGAATTAATCAGCGGCCCCGATCGAGCAAAATCCCACATAGTTCGTGTGATTGAAGGATTTGAAACTGTGATGTTCAAGTCCAAATTTGATTCTTGGCCTCAAACACCTAATGTAACTGTGTCAGAAGATGGACGTGGCAGGGTGGCAGCACTTCTAAGGCGTCAGGGAGTGGATGTTAAGGGTCTGTTGAAAGCTGATCCAGTAAAAGAAGAACCTCAACCCCACATTGATTGCACAGGACGTTTGCAGGTTTGGCGGGTGAATGGCCAGGAAAAGACTCTCCTTCAAGAATCTGATCAATCAAAACTTTTTAGTGGTGATTGCTATGTCTTTCTCTACTCATATCCAGGAGAAGATAGAGAAGAGCATCTTGTAATGACATGGATTGGAAAGAACAGTGTTGAGGAAGAAAGAGCTTCAGCTATTTCAATGGCAAGCAAAATCATTGAAACAATGAAGTTTATTCCTACCCAGGCTCGAATTTATGAAGGGAATGAATCGATTCAGTTTTATTCTATCCTCCAAACCTTAATTGTTTATAAGGGTGGTCTTAGTGAAGGATATAAGAATTACATTAAGGAGAAGGAAACTCCAGATGATACTTACAAGGAAGATGGTATAGCACTGTTCCGCATCCAGGGCTCTGGACCTGAAAGTATGCAAGCTATACAAGTCGAACCGGTTGCTTCCTCCTTGAATTCCTCATATTGCTACATACTTCATGATGGGCCCACAGTCTTCACTTGGCTAGGGAGCCTTACAAACACAGATGACCATGAACTAGTTGAGAGGATGCTAGATTTGATAAAGCCGGAATTACAAACCAAACAACACAAGGAAGGTTCAGAGTCTGAACAGTTTTGGGATTTGTTAGGAGGAAAATTAGAATATCCCAGTCAAAAGATTGTAAGGGATGCTGAATGCGATCCTCACCTATTTTCTTGCAACTTCTCAAAAGAAAATTTGAAGGTTGAGCAGGTGACAGAAGTATACAACTTCTCCCAGGATGATTTAATGACTGAAGATATAATGATCTTGAATTGTCACTCAGAAATCTTTGTCTGGGTTGGCCAGCAAATTGACCTCAAGAGTAGAGCAAAAGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGATTTTTGTATGGAAAATTTATCTCGTGAAGCTCCAATATATGTTATCATTGAAGGCAGTGAACCACCTTTTTTCACTCGCTTCTTCAAATGGGAGTCTGCAAAATCTGCGATGCTGGGAAACTCATTTCAAAGGAGGCTTACAATACTGAAAAATGGGGGCACTGCACCTTTGGATAGACCAAAAAGGAGAACAACAGTATCTTATGGAGGAAGGTCCAGTGGTACACCGGAAAAGCCACAGCGTTCTCGCAGTGTATGCGCTACACCTGACCGTGTTCGTGTGAGAGGCAGGTCACCAGCCTTTAATGCATTAGCAGCTGCATTTGAAGGTCCCAAGGATAGAAACCTTTCAACGCCACCTCCTATTGTTAGGAAGCTGTATGCAAAATCTCTGACCCCAGAATCAGCAAAATTGGCACCCAAATCTGCAGCTATAGCTGCTCTTACTTCAAGTTTTGAATCATTCCGCCCATCAAAAGAAAATTTTATACCTCGATCATTCAGAGTGAACCGGGAGGCCTCGAAGCCGGAGACAAGTAAAGAGAAAGATTCTATGAGCAGTATAGAAGAAGATGTGAAAGAGGGTGAAGCTGATGACGATGAAGGTCTCCCAGTTTATCCATATGAACGCCTCAAAATAGGATCTGATGATCCTGTAACAGACATTGATGTGACCAGGAGAGAGGCTTATATGTCAGCTGAGGAGTTCAAAGAGAAGTTTGGGATGACAAAAAAGGACCTCTACAAGTTGCCCAAATGGAAACAGAACAAACTCAAGATGGTCATTCACTTATTTTAA 2865 0.4182 MSVSMRDLDPAFQGAGQKAYPKSNKDIVLGLEIWRIENLKPVAVPTSSHGKFFTGDSYVILKTTASKSGALRYDIHYWLGKDTSQDEAGVAAIKTIELDAALGGRAVQYRESQGHETKKLLSYFRPCIIPQEGGVATGFKHVEAEEHTTRLYVPFARSTLNHDDVFILDTQSKIFQFNGSNSSIQERAKALEVLQYIKDNYHDGKCEIASVEDGRLMADADAGEFWAFFGGFAPLPRKTASDDDNTVDSHSPKLLCIVKGKAEAIESDSLTRELLDTNKCYILDCGLEVFVWTGRNTSLDERKSASAAAEELISGPDRAKSHIVRVIEGFETVMFKSKFDSWPQTPNVTVSEDGRGRVAALLRRQGVDVKGLLKADPVKEEPQPHIDCTGRLQVWRVNGQEKTLLQESDQSKLFSGDCYVFLYSYPGEDREEHLVMTWIGKNSVEEERASAISMASKIIETMKFIPTQARIYEGNESIQFYSILQTLIVYKGGLSEGYKNYIKEKETPDDTYKEDGIALFRIQGSGPESMQAIQVEPVASSLNSSYCYILHDGPTVFTWLGSLTNTDDHELVERMLDLIKPELQTKQHKEGSESEQFWDLLGGKLEYPSQKIVRDAECDPHLFSCNFSKENLKVEQVTEVYNFSQDDLMTEDIMILNCHSEIFVWVGQQIDLKSRAKALTIGEKFLEHDFCMENLSREAPIYVIIEGSEPPFFTRFFKWESAKSAMLGNSFQRRLTILKNGGTAPLDRPKRRTTVSYGGRSSGTPEKPQRSRSVCATPDRVRVRGRSPAFNALAAAFEGPKDRNLSTPPPIVRKLYAKSLTPESAKLAPKSAAIAALTSSFESFRPSKENFIPRSFRVNREASKPETSKEKDSMSSIEEDVKEGEADDDEGLPVYPYERLKIGSDDPVTDIDVTRREAYMSAEEFKEKFGMTKKDLYKLPKWKQNKLKMVIHLF 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g0937 954 CDD gelsolin_S5_like 515 604 - -
Alju13g0937 954 Gene3D Villin headpiece domain 892 954 IPR036886 GO:0003779|GO:0007010
Alju13g0937 954 FunFam Gelsolin 15 141 - -
Alju13g0937 954 SUPERFAMILY Actin depolymerizing proteins 222 347 - -
Alju13g0937 954 CDD gelsolin_S4_like 386 483 - -
Alju13g0937 954 SUPERFAMILY VHP, Villin headpiece domain 881 954 IPR036886 GO:0003779|GO:0007010
Alju13g0937 954 CDD gelsolin_S3_like 259 341 - -
Alju13g0937 954 SUPERFAMILY Actin depolymerizing proteins 593 718 - -
Alju13g0937 954 CDD gelsolin_S1_like 12 134 - -
Alju13g0937 954 MobiDBLite consensus disorder prediction 856 892 - -
Alju13g0937 954 MobiDBLite consensus disorder prediction 755 771 - -
Alju13g0937 954 SUPERFAMILY Actin depolymerizing proteins 29 152 - -
Alju13g0937 954 Pfam Gelsolin repeat 268 335 IPR007123 -
Alju13g0937 954 Pfam Gelsolin repeat 639 713 IPR007123 -
Alju13g0937 954 Pfam Gelsolin repeat 153 214 IPR007123 -
Alju13g0937 954 Pfam Gelsolin repeat 40 118 IPR007123 -
Alju13g0937 954 Gene3D Severin 245 353 IPR029006 -
Alju13g0937 954 Gene3D Severin 378 520 IPR029006 -
Alju13g0937 954 MobiDBLite consensus disorder prediction 859 880 - -
Alju13g0937 954 PRINTS Gelsolin family signature 321 342 IPR007122 GO:0051015
Alju13g0937 954 PRINTS Gelsolin family signature 409 425 IPR007122 GO:0051015
Alju13g0937 954 PRINTS Gelsolin family signature 467 487 IPR007122 GO:0051015
Alju13g0937 954 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Alju13g0937 954 PRINTS Gelsolin family signature 530 550 IPR007122 GO:0051015
Alju13g0937 954 PRINTS Gelsolin family signature 434 452 IPR007122 GO:0051015
Alju13g0937 954 PRINTS Gelsolin family signature 590 609 IPR007122 GO:0051015
Alju13g0937 954 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Alju13g0937 954 Gene3D Severin 143 244 IPR029006 -
Alju13g0937 954 FunFam Villin-4 246 352 - -
Alju13g0937 954 Gene3D Severin 613 733 IPR029006 -
Alju13g0937 954 FunFam Villin-like 1 611 735 - -
Alju13g0937 954 PANTHER VILLIN 9 944 IPR007122 GO:0051015
Alju13g0937 954 ProSiteProfiles Headpiece (HP) domain profile. 889 954 IPR003128 GO:0003779|GO:0007010
Alju13g0937 954 Gene3D Severin 17 142 IPR029006 -
Alju13g0937 954 Pfam Villin headpiece domain 919 954 IPR003128 GO:0003779|GO:0007010
Alju13g0937 954 SUPERFAMILY Actin depolymerizing proteins 141 237 - -
Alju13g0937 954 SUPERFAMILY Actin depolymerizing proteins 509 611 - -
Alju13g0937 954 MobiDBLite consensus disorder prediction 741 776 - -
Alju13g0937 954 SUPERFAMILY Actin depolymerizing proteins 380 526 - -
Alju13g0937 954 FunFam Gelsolin 516 610 - -
Alju13g0937 954 CDD gelsolin_S6_like 619 719 - -
Alju13g0937 954 Gene3D Severin 521 611 IPR029006 -
Alju13g0937 954 SMART VHP_1 919 954 IPR003128 GO:0003779|GO:0007010
Alju13g0937 954 SMART VILL_6 252 342 IPR007122 GO:0051015
Alju13g0937 954 SMART VILL_6 29 127 IPR007122 GO:0051015
Alju13g0937 954 SMART VILL_6 517 604 IPR007122 GO:0051015
Alju13g0937 954 SMART VILL_6 137 232 IPR007122 GO:0051015
Alju13g0937 954 SMART VILL_6 620 720 IPR007122 GO:0051015
Alju13g0937 954 SMART VILL_6 390 487 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g0937 Alju-ChrAlju13 27650554 27657536 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju13g0937 13 27650554 27657536 Alju06g1184 06 11979944 11986013 CCT