Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1184 ATGGCTGTTTCCATGAGGGACTTGGATCCAGCTTTCCAGGGAGCTGGACAAAAGGCTGGACTGGAAATATGGCGTATTGAGAATTTTAATCCAGTTCCCATCCCCAAGTCCTCTTATGGGAAGTTTTTCACTGGGGACTCCTATGTAATCTTGAAGACAACTGCTTCAAAGAGTGGTGCCCTGCGTCATGATATTCATTACTGGCTTGGAAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCGTCAAGACAGTTGAGCTGGATGCAGCTCTTGGAGGCCGTGCTGTTCAATATCGTGAAGTGCAGGGTCATGAAACTGAAAAGTTCCTGTCTTACTTCAAACCCTGTATTATACCTCAGGAGGGCGGAGTTGCATCTGGTTTTAAGCATGTAGAGGATGAAGAATATAAGATTCGAATGTTTATATGCAAAGGGAAACATGTTGTGCATGTCAAAGAGGTTCCTTTTGCTCGATCATCACTAAACCATGATGATATATTTATTCTGGATACAAAATCCAAAATCTTCCAATTTAATGGTTCAAATTCATCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTGCAATATATTAAAGATACACACCATGATGGGAAATGCGAGGTAGCTGCTATTGAGGATGGGAAGTTGATGGCTGATCCTGAAACTGGAGAATTCTGGGGTTTCTTTGGGGGTTTTGCCCCTCTTCCACGAAAACCAGCCAGTGATGATGATCAGCATGTTGATACTCATCTTCCAAAGCTGCTTAGCATTGAAAAGGGGGTAGCTGAACCCATTAAGAACGAATCTCTGACAAGGGAGTTACTGGACACGAATAAATGCTATATTCTTGATTGTGGGCTGGAAATGTTTGTCTGGATGGGAAGAAATACCTCTCTTGATGAAAGAAAAAGTGCAAGCGGGGCGGCTGATGAGTTAGTCAGTGGCTCCGATCGACTGAAATCCCAGATAATTCGTGTAATTGAAGGATTTGAAACAGTGATGTTCAAGTCCAAGTTCGATTCTTGGCCTCAGACGACTGAAGTAACTGTGTCTGAAGATGGTCGTGGAAAGGTGGCAGCACTTCTGAAACGCCAAGGAGTGAATGTCAGGGGTCTGCTGAAAGCTGATCCAGTAAAAGAAGAACCTCAACCCTATATTGATTGCACAGGAAATTTGCAGGTTTGGCGTGTAAATGGTCAGGAAAAGATTCTCCTTCCTGCTTCTGATCAGTCAAAGCTTTATAGTGGAGATTACTACATCTTTCAATATACGTATCCTGGAGATGATAAGGAAGAGTATCTTATAGGAACATGGATTGGAAAGAATAGTGTTGAGGAAGAAAGAGCTTCAGCTATTTCACTGGCAAGCAAAATGGTTGAGTCATTGAAGTTTCTTCCTTCCCAGACTCGTATTTATGAAGGGAATGAACCAATTCAATTTTATACTATCTTCCAAAGCTTGATTGTTTTTAAGGGTGGACTTAGTGATGGATACAAAAATTACATTGCGGAAAAGGAAATTCCTGATGATACGTACAGTGAGGATGGTGTTGCACTATTTCGCATCCAGGGTTCAGGCCCAGACAATATGCAAGCTATCCAAGTTGAACCAGTTGCTTCCTCATTGAATTCCTCTTACTGCTACGTACTTCATAATGGGTCCACTGTCTTTACATGGACTGGAAACCTTACAACCTCAGATGTTCAGGAACTTGTCGAGAGAATGCTGGATTTGATAAAGCCAAATTTACAATCAAAGCCCCAAAAGGAAGGGTCAGAACCTGAACAGTTTTGGGATTTGTTGGGAGGAAAATCTGAGTATCCTAGCCAGAAGATTGTAAAGTGTGCTGAAAGTGATCCTCACCTATTTTCTTGCAACTTCTCAAAAGCAATATTTGCAGGTGTCGGAGATATTCAATTTTTCCCAGGATGA 1938 0.4211 MAVSMRDLDPAFQGAGQKAGLEIWRIENFNPVPIPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHVEDEEYKIRMFICKGKHVVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTHHDGKCEVAAIEDGKLMADPETGEFWGFFGGFAPLPRKPASDDDQHVDTHLPKLLSIEKGVAEPIKNESLTRELLDTNKCYILDCGLEMFVWMGRNTSLDERKSASGAADELVSGSDRLKSQIIRVIEGFETVMFKSKFDSWPQTTEVTVSEDGRGKVAALLKRQGVNVRGLLKADPVKEEPQPYIDCTGNLQVWRVNGQEKILLPASDQSKLYSGDYYIFQYTYPGDDKEEYLIGTWIGKNSVEEERASAISLASKMVESLKFLPSQTRIYEGNEPIQFYTIFQSLIVFKGGLSDGYKNYIAEKEIPDDTYSEDGVALFRIQGSGPDNMQAIQVEPVASSLNSSYCYVLHNGSTVFTWTGNLTTSDVQELVERMLDLIKPNLQSKPQKEGSEPEQFWDLLGGKSEYPSQKIVKCAESDPHLFSCNFSKAIFAGVGDIQFFPG 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1184 645 CDD gelsolin_S4_like 386 486 - -
Alju06g1184 645 Pfam Gelsolin repeat 271 337 IPR007123 -
Alju06g1184 645 Pfam Gelsolin repeat 150 216 IPR007123 -
Alju06g1184 645 Pfam Gelsolin repeat 28 111 IPR007123 -
Alju06g1184 645 FunFam Villin-4 248 354 - -
Alju06g1184 645 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 252 427 IPR036180 -
Alju06g1184 645 FunFam Villin-like 1 132 247 - -
Alju06g1184 645 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Alju06g1184 645 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Alju06g1184 645 CDD gelsolin_S2_like 140 223 - -
Alju06g1184 645 Gene3D Severin 522 613 IPR029006 -
Alju06g1184 645 FunFam Gelsolin 6 131 - -
Alju06g1184 645 SUPERFAMILY Actin depolymerizing proteins 129 243 - -
Alju06g1184 645 SMART VILL_6 252 344 IPR007122 GO:0051015
Alju06g1184 645 SMART VILL_6 392 489 IPR007122 GO:0051015
Alju06g1184 645 SMART VILL_6 19 117 IPR007122 GO:0051015
Alju06g1184 645 SMART VILL_6 519 606 IPR007122 GO:0051015
Alju06g1184 645 SMART VILL_6 137 234 IPR007122 GO:0051015
Alju06g1184 645 Gene3D Severin 7 132 IPR029006 -
Alju06g1184 645 CDD gelsolin_S5_like 517 608 - -
Alju06g1184 645 FunFam Villin-4 385 519 - -
Alju06g1184 645 CDD gelsolin_S1_like 12 124 - -
Alju06g1184 645 Gene3D Severin 247 357 IPR029006 -
Alju06g1184 645 Gene3D Severin 381 521 IPR029006 -
Alju06g1184 645 SUPERFAMILY Actin depolymerizing proteins 511 612 - -
Alju06g1184 645 FunFam Gelsolin 520 612 - -
Alju06g1184 645 Gene3D Severin 133 246 IPR029006 -
Alju06g1184 645 CDD gelsolin_S3_like 253 343 - -
Alju06g1184 645 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Alju06g1184 645 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Alju06g1184 645 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Alju06g1184 645 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Alju06g1184 645 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Alju06g1184 645 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Alju06g1184 645 PANTHER VILLIN 7 634 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1184 Alju-ChrAlju06 11979944 11986013 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1184 06 11979944 11986013 Alju13g1159 13 30337897 30339590 CCT
Alju13g0937 13 27650554 27657536 Alju06g1184 06 11979944 11986013 CCT
Alju06g1184 06 11979944 11986013 Alju06g1184 06 11979944 11986013 ECH