Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1797 ATGGCGAGAAGATCAGCGTCACTTCTTAAACAGCTCTTCACTACATTGGAATCATCGGACACTCCCAACGTCTTCTCCTCATGCTCCCGATTTATTCCCTCCCGATCCGTCACTTACATGCCCCGACCTGGGGATGGGGCTCCACGCGCCGTCACCCTTATTCCCGGCGATGGAATTGGACCTCTCGTAACTGGCGCTGTTGAGGAAGTGATGGAGGCGATGCACGCGCCGGTTTACTTCGAGAAGTATGAAGTACACGGTGACATGCCCAGGGTGCCGCAGGAGGTGATCGATTCGATCAAGAAGAACAAGGTTTGCTTGAAGGGTGGATTGGCTACACCCATGGGCGGTGGTGTCAGCTCGTTGAACGTGCAGCTAAGGAAAGAGCTTGATCTGTATGCTTCGCTCGTGAATTGCTTTAATCTTCCTGGCTTGGTGACTAGGCACGAGAATGTTGATATTGTCGTGATTAGGGAGAATACGGAGGGAGAGTATTCTGGCCTGGAGCATGAGGTCGTTCCGGGAGTCGTTGAAAGCCTTAAGGTGATCACAAAGTTCTGCTCAGAGCGTATTGCTAAATATGCTTTTGAGTATGCTTATCTAAACAACAGAAAGAAAGTGACTGCCGTGCACAAAGCAAATATTATGAAGCTAGCAGATGGCTTATTCTTGGAATCCTGTCGAGAGGTTGCCACAAAGTATCCTGGAATCAAGTATAATGAAATTATTGTGGATAACTGCTGCATGCAGCTTGTTTCAAAGCCTGAGCAGTTTGATGTCATGGTAACCCCAAATCTTTATGGAAATCTAGTTGCAAATACAGCAGCAGGTATTGCTGGAGGCACTGGGGTAATGCCCGGAGGAAATGTTGGGGCCGATCATGCTGTGTTTGAGCAAGGTGCTTCAGCAGGAAATGTTGGTAATGATAAATTATTGGAGCAAAAGATAGCAAACCCGGTAGCACTGCTTCTCTCATCAGCCATGATGCTTAGACATCTTCAGTTTCCCGCATTTGCTGACCGATTGGAAACCGCTGTGAAACGAGTCATTCTTGAGGGCAAACACCGGACAAAAGACCTCGGAGGGCAAAGCACCACCCAAGAGGTTGTTGATGCAGTGTTGAATTCTTTAGTCTGA 1137 0.4811 MARRSASLLKQLFTTLESSDTPNVFSSCSRFIPSRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTGAVEEVMEAMHAPVYFEKYEVHGDMPRVPQEVIDSIKKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLVTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNDKLLEQKIANPVALLLSSAMMLRHLQFPAFADRLETAVKRVILEGKHRTKDLGGQSTTQEVVDAVLNSLV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1797 378 NCBIfam isocitrate dehydrogenase (NAD(+)) 47 377 IPR004434 GO:0006099
Alju12g1797 378 SMART Iso_dh_2 50 373 IPR024084 -
Alju12g1797 378 Pfam Isocitrate/isopropylmalate dehydrogenase 51 373 IPR024084 -
Alju12g1797 378 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 50 376 - -
Alju12g1797 378 Gene3D Isopropylmalate Dehydrogenase 38 378 - -
Alju12g1797 378 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 37 376 - -
Alju12g1797 378 FunFam Isocitrate dehydrogenase [NAD] regulatory subunit 1 38 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1797 Alju-ChrAlju12 39073210 39076641 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2451 09 47410195 47412467 Alju12g1797 12 39073210 39076641 CCT
Alju12g1797 12 39073210 39076641 Alju12g1797 12 39073210 39076641 ECH