Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2451 ATGGCGAGAAGATGCGCACCACTCCTTAAACAAATCTTCACCAGATCACAATCGTTAGATCAGTGCCCGCCGACGACCATCCTGACGTCATGCTGCAGCAGATTCAAGCCGGAGCGATCCGTGACGTACATGCCCCGGCCCGGCGATGGGTCTCCACGCACCGTCACCCTCATACGGGGAGATGGCATAGGGCCTCTGGTGACCGGAGCCGTGGAGCAAGTGATGGAGGCGATGCACGCGCCGGTGCACTTCGAGAAATATGAAGTGCGAGGGCAGATGGAGAGAGTGCCAGAGGAGGTGATGGATTCGATCAGGAGGAACAAAGTGTGCTTGAAGGGCGGTCTGGCCACGCGTATGGGCGGAGGAGTCAGCTCCTTGAACGTCCAGCTAAGGAAAGAGCTTGATCTCTACGCTTCCCTCGTTAATTGTTTCAATCTTCCCGGCCTCACCACAAGGCATCACAATGTCGATATCGTTGTCATCCGGGAGAACACCGAGGGCGAGTACGCCGGTTTGGAGCACGAGGTTGTCCCCGGCGTTGTCGAAAGTCTCAAGGTAATAACAAAGTTCTGTTCAGAGCGCATTGCTAGATATGCTTTCGAGTATGCTTACCTGAATAACAGAAAGAAGGTGACTGCGGTGCACAAAGCAAACATCATGAAGCTGGCAGACGGCTTGTTTTTGGAATCTTGCAGAGAGGTCGCCAGCTATTATCCTGCAATCCAATATAACGAGATAATTGTGGATAACTGTTGCATGCAACTTGTTTCAAAACCTGAGCAGTTTGATGTCATGGTAACGCCGAATCTGTATGGGAATCTAGTGGCGAACACGGCAGCAGGCATTGCAGGGGGCACGGGAGTGATGCCGGGAGGGAATGTCGGGGCAGAGCATGCGGTGTTTGAGCAAGGTGCTTCGGCGGGGAATGTGGGGAACGAGAAGCTGGTGGAGCAGAAGACGGCGAACCCGGTGGCGCTGCTGCTGTCATCGGCCATGATGCTGCGGCATCTGCAGTTTCCGGCGTTTGCTGACCGATTGGAGAATGCGGTGATGGCAGTGATACTGGAGGGCAAGCACTGCTCTAAAGACCTGGGAGGTTCCAGCACCACCCAAGAGATTGTTGACGCCGTCATAGCTGCCTTACAATGA 1149 0.544 MARRCAPLLKQIFTRSQSLDQCPPTTILTSCCSRFKPERSVTYMPRPGDGSPRTVTLIRGDGIGPLVTGAVEQVMEAMHAPVHFEKYEVRGQMERVPEEVMDSIRRNKVCLKGGLATRMGGGVSSLNVQLRKELDLYASLVNCFNLPGLTTRHHNVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIARYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVASYYPAIQYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGNEKLVEQKTANPVALLLSSAMMLRHLQFPAFADRLENAVMAVILEGKHCSKDLGGSSTTQEIVDAVIAALQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2451 382 SMART Iso_dh_2 54 377 IPR024084 -
Alju09g2451 382 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 45 381 - -
Alju09g2451 382 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Alju09g2451 382 Gene3D Isopropylmalate Dehydrogenase 42 381 - -
Alju09g2451 382 NCBIfam isocitrate dehydrogenase (NAD(+)) 51 380 IPR004434 GO:0006099
Alju09g2451 382 Pfam Isocitrate/isopropylmalate dehydrogenase 54 377 IPR024084 -
Alju09g2451 382 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 53 381 - -
Alju09g2451 382 FunFam Isocitrate dehydrogenase [NAD] regulatory subunit 1 42 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2451 Alju-ChrAlju09 47410195 47412467 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2451 09 47410195 47412467 Alju12g1797 12 39073210 39076641 CCT
Alju09g2451 09 47410195 47412467 Alju09g2451 09 47410195 47412467 ECH