Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0090 ATGTACTGGCGTCTTCGGGAAGGAATAACTCGGCAACAAGGGGTGCGATCTATGCTATATAGACATTCATCTGCGTCTCTTTCTTCACTTTGTTCAACTTCAACCTCCAAATCTGTACTGGGAGATGTTTGTGTCGATGATATACACACTAGCTGTAACAATAGGCTGGACTTCAATAAGTCTGGTGCTGTTTACTTTGGTGACAGAACCCGTAAAGGTTGCCTAAGAGCTCATTTGAACCTGAACAGAAAAGATTCAATAAATAGTGATCTTAATATTCGGCATTCGACTCTTGGTGCTATTTCAAGTTTTCCTCATCGACCTTGGCTGAGGAATTTCTCTTTTACATTTTGTACTTCCTACTTTGCTCGGGCAGCACACAGTGCGTCATATGTCAGCAGCGCTTGTGATGAACAGCTAGAAAATTCATCCCCTACAATAGACCTAACAATTAATGGTGGCAAGACTTTGAAGCTATTTTCAGGATCTAATTACCTGCCACATCCAGATAAGGAGGAGACAGGGGGGGAAGATGCTCATTTTATCTGCTCTGATGAACAAGTATTTGGTGTTGCTGATGGTGTAGGAGGTTGGGCTGAAGTTGGTGTTAATGCGGGACTGTTTTCTCGTGAACTTATGTCCAATTCAGTAAGAGCAATCCAAGAGGAACCAAAAGGTTCTATTAATCCAGCGAGGGTGTTAGAGAAGGCTCACTCAAATACAAGAGCCGAGGGGTCATCAACAGCCTGTATCATTGCCCTTGCTGAGAAGGAGCTACATGCTATTAATTTGGGTGACAGTGGATTCATTGTGGTTAGAGATGGAAGCACCATTTTCAAGTCCCCTGTTCAATTGCATGGCTTCAATTTTACATATCAATTGGAGAGCGGCGATGGAGGTGATTTACCCAGTTCTGGTGAGGTGTTTACAGTGCCTGTTGCTGGAGGAGATGTTGTGATTGCTGGAACAGACGGATTATTTGACAACTTGTACATTAATGAAATTACAGCAGTTGTAGTCCATGCAATCAGAGCGAGATTAGAACCCCAAGTTAGTGCGCAGAAGATAGCTGCACTGGCCCGTCAGCGAGCACTGGACAAAAATAGGCAGACTCCATTTTCCGCTGCTGCTCAAGAGGCCGGCTACCGGTATTATGGTGGCAAGCTCGATGACATTACCGTTGTCGTATCATACATAATCTCATCAAACTCCTGA 1215 0.4403 MYWRLREGITRQQGVRSMLYRHSSASLSSLCSTSTSKSVLGDVCVDDIHTSCNNRLDFNKSGAVYFGDRTRKGCLRAHLNLNRKDSINSDLNIRHSTLGAISSFPHRPWLRNFSFTFCTSYFARAAHSASYVSSACDEQLENSSPTIDLTINGGKTLKLFSGSNYLPHPDKEETGGEDAHFICSDEQVFGVADGVGGWAEVGVNAGLFSRELMSNSVRAIQEEPKGSINPARVLEKAHSNTRAEGSSTACIIALAEKELHAINLGDSGFIVVRDGSTIFKSPVQLHGFNFTYQLESGDGGDLPSSGEVFTVPVAGGDVVIAGTDGLFDNLYINEITAVVVHAIRARLEPQVSAQKIAALARQRALDKNRQTPFSAAAQEAGYRYYGGKLDDITVVVSYIISSNS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0090 404 SMART PP2C_SIG_2 173 399 IPR001932 -
Alju12g0090 404 PANTHER PROTEIN PHOSPHATASE 2C 120 403 IPR039123 -
Alju12g0090 404 ProSiteProfiles PPM-type phosphatase domain profile. 160 399 IPR001932 -
Alju12g0090 404 SUPERFAMILY PP2C-like 166 396 IPR036457 -
Alju12g0090 404 Gene3D - 302 402 IPR036457 -
Alju12g0090 404 FunFam 5-azacytidine resistance protein azr1 168 293 - -
Alju12g0090 404 Pfam Stage II sporulation protein E (SpoIIE) 188 397 IPR001932 -
Alju12g0090 404 SMART PP2C_4 150 397 IPR001932 -
Alju12g0090 404 Gene3D - 170 289 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0090 Alju-ChrAlju12 1093474 1096366 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2248 09 45738132 45744793 Alju12g0090 12 1093474 1096366 CCT
Alju12g0090 12 1093474 1096366 Alju12g0090 12 1093474 1096366 ECH
Alju12g0090 12 1093474 1096366 Alju09g2248 09 45738132 45744793 ECH