Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2248 ATGCCAATTGGCAGTAAGTGGTTTAATAATTATTTTACTGGAGAATGTGGCCTGTCATCATCTAGTGTGATAGAGACTTTGTATAGCATTTCAGTTCTCTTCCTTCCGAAAATCCCATCTTCTGCCCTATTTATAGCGTGTTTCCTCACTTCCCTATCTGACATTACCTGCTGTCCTTCAACCCCCGCACCTTCAAGAGAATCAATGGCTGCGTCAACTTCCAAAGCTTTCTTGGGAGATATCTATGTGGATGATATCGCCACCAGTTGCATCAGTGCACTAGACAACATCACAAAGCATACTGGTGTTTACTTCAAGGACAGAAGTCGTAAAGGTTGCATGCGAGTTAATGTGGATATTAGAAGGCCAAAACCGTTGAATGGTCCTCTAAATTCTCGGTATTCCATTTTTTATGCTAATTGGAGAAGGCAGAACTCTGGCTTATGCCATGGACCGTGGCTGAAGAATTTCTCTGTTACCTCTCCTGCTTGCTTCGCAGCGGGGGCTGCACAAGAAGTCTCATGTGATGGCTGCATTCCTGATGACCAACTTTCAAATTCTTCCCTTTCTCCTGAGCAACCCATTGGAAGTGAGGGGACCTTGAAGCTGGTTTCAGGATCATGTTACCTACCTCATCCAGCTAAGGAGGAGACGGGTGGAGAGGATGCTCATTTTATTTGCTCAGACAGACAAGCAATCGGTGTTGCAGATGGTGTAGGAGGCTGGGCAGATGTTGGTGTTAATGCAGGAATTTTTGCCCGTGAACTTATGTCTAATTCAGTAAGAGCAATTCAGGAGGAACCACAAGATTCTATCAATCCATTAAGGGTGTTGGAGAGGGCTCACTCATGTACAACGGCCAAGGGTTCATCAACAGCTTGTATCATTGCCCTTAATGATATGGAGCTACATGCTATTAATCTGGGTGACAGTGGATTCGTTGTGATCAGAGATGGACGCACCATTTACAAGTCCCATTTTCAACAGCATGGCTTCAATTTTACATATCAATTGGAGAGTGGCAATGGAGGCGATCTACCCAGCTCTGGCGAGGTTTCTGCGATGCCTGTTGCCCCGGGAGATGTTGTCGTTGCAGGAACCGATGGACTATATGACAACTTGTACAACAATGAGATTACTGCGATTGTTGTAGAGGCAGTAAGGGATGGACTAGAAACCCAAATAGCTGCTCAGAAGATAGCAGCACTAGCTCGTCATAGGGCAATGGACCGGAATCGGCAGACACCATTTTCGGTTGCTGCTCAAGAGGCTGGGTTCCGCTATCATGGCGGCAAACTTGATGACATTACAGTTGTTGTATCGTACATAACAGAGCTCAATTAG 1344 0.4554 MPIGSKWFNNYFTGECGLSSSSVIETLYSISVLFLPKIPSSALFIACFLTSLSDITCCPSTPAPSRESMAASTSKAFLGDIYVDDIATSCISALDNITKHTGVYFKDRSRKGCMRVNVDIRRPKPLNGPLNSRYSIFYANWRRQNSGLCHGPWLKNFSVTSPACFAAGAAQEVSCDGCIPDDQLSNSSLSPEQPIGSEGTLKLVSGSCYLPHPAKEETGGEDAHFICSDRQAIGVADGVGGWADVGVNAGIFARELMSNSVRAIQEEPQDSINPLRVLERAHSCTTAKGSSTACIIALNDMELHAINLGDSGFVVIRDGRTIYKSHFQQHGFNFTYQLESGNGGDLPSSGEVSAMPVAPGDVVVAGTDGLYDNLYNNEITAIVVEAVRDGLETQIAAQKIAALARHRAMDRNRQTPFSVAAQEAGFRYHGGKLDDITVVVSYITELN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2248 447 Gene3D - 212 339 IPR036457 -
Alju09g2248 447 PANTHER PROTEIN PHOSPHATASE 2C 182 445 IPR039123 -
Alju09g2248 447 FunFam 5-azacytidine resistance protein azr1 212 337 - -
Alju09g2248 447 SMART PP2C_4 194 441 IPR001932 -
Alju09g2248 447 Pfam Stage II sporulation protein E (SpoIIE) 229 441 IPR001932 -
Alju09g2248 447 CDD PP2Cc 220 440 IPR001932 -
Alju09g2248 447 SUPERFAMILY PP2C-like 209 440 IPR036457 -
Alju09g2248 447 ProSiteProfiles PPM-type phosphatase domain profile. 207 443 IPR001932 -
Alju09g2248 447 Gene3D - 345 446 IPR036457 -
Alju09g2248 447 SMART PP2C_SIG_2 203 443 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2248 Alju-ChrAlju09 45738132 45744793 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2248 09 45738132 45744793 Alju12g0090 12 1093474 1096366 CCT
Alju09g2248 09 45738132 45744793 Alju09g2248 09 45738132 45744793 ECH
Alju12g0090 12 1093474 1096366 Alju09g2248 09 45738132 45744793 ECH