Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0805 ATGACCACCAAAATGATGAGGAAGCAATCATCAGATCCAGCAGATGGATCCTCCTCTGAGAGCTGGTTGGACGATGCTTGCATTCTCGACATCGATTTCTTTGTCAAAACTCTCTCGGGCATTAAATCAAAAGGCGTATGCGCAGATTTAATCGGCTCTGTTATCACTCACTACGCCTCCAAATGGCTCCCTGAAATTTCTTCAATTAACGTCGCAGAACGAAGCCTCACTCAATTCCAAGAATCCCCCGAAATCGTCGCCATTTCGTGGATGAAGAAGCGATTCTTCGTCGAAACCCTAATCGGCGTTCTGCCTCCAGAGAAAAACTCGATCCCCTGCAATTTCCTACTCCGGCTTCTCAGAACAGCCAATATGGTCGGCGTTGAGGCGGCGTTCAGATCGGAGCTAGAGAAGAGGATTTCACGGCAGCTCGACGAGGCCTCGTTGAAGGAACTGATGATTCCTTCTTTCAATCACACTTGTGGGACATTGTTGGATGTGGATCTTGTAATTAGGTTGGTGAATGGGTTCGTGAGTTTGGATCGTGAGGGAGTGAAGACTAGTGCTGCTTTGGTTAAGGTGGCTAAGTTAGTGGATTCGTACCTCGCCGAGGCCGCCATTGATGGCAATTTGAGCTTGTCGGAGTTCGTTGCGCTTGCCGGAGCTCTTCCTTCTCATGCGAGAGCTACAGACGACGGCTTGTACAGAGCCATTGACACTTATCTTAAAGTGCATGCAGGGGCATCGAAGCAAGAAAGGAAGGGATTGTGCAGACTGGTAGATAGCAGCAAACTCACAGCGGAGGCATCACTTCATGCGGCTCAAAACGAACGCTTGCCGGTCCGAGCAGTGTTACAGGTTCTCTTCTCCGAGCAAACAAAACGGAACCACCGGCACCACCACCACCTGGAGTCGTCGGAGCAGGCGGCGAGGTGCGGGTCGAGGCGAGAAGTGATGGAGATAAAGAAACTGAAGGAAGAGGTTGTGAGACTGCAAAGTCAATGCAATGCGATGCAGGCCCAGATGGAGAGGATGACGGAGAAGAGGAAGCTCGGCTTCTTCTGGTGGAAGAAGCCTGCCACAATACCGACCTCTGCCGCCGCCGGCTGCGGCGGCTTAAGTAGGAGTGTTGAGATGAATAACAATGAAGATGATAAGGATGAGGTGGATGGGCTTGTAGGGTTTCGGAGACAAACGCCTATGCACGTGAGGACGAGGCTGCTCAAGCCTAAGACTCATCATCCCAAGTCGAGGAGATCCATGTCTTGA 1269 0.5114 MTTKMMRKQSSDPADGSSSESWLDDACILDIDFFVKTLSGIKSKGVCADLIGSVITHYASKWLPEISSINVAERSLTQFQESPEIVAISWMKKRFFVETLIGVLPPEKNSIPCNFLLRLLRTANMVGVEAAFRSELEKRISRQLDEASLKELMIPSFNHTCGTLLDVDLVIRLVNGFVSLDREGVKTSAALVKVAKLVDSYLAEAAIDGNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKVHAGASKQERKGLCRLVDSSKLTAEASLHAAQNERLPVRAVLQVLFSEQTKRNHRHHHHLESSEQAARCGSRREVMEIKKLKEEVVRLQSQCNAMQAQMERMTEKRKLGFFWWKKPATIPTSAAAGCGGLSRSVEMNNNEDDKDEVDGLVGFRRQTPMHVRTRLLKPKTHHPKSRRSMS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0805 422 Coils Coil 314 348 - -
Alju11g0805 422 MobiDBLite consensus disorder prediction 1 21 - -
Alju11g0805 422 MobiDBLite consensus disorder prediction 1 18 - -
Alju11g0805 422 ProSiteProfiles NPH3 domain profile. 20 294 IPR027356 -
Alju11g0805 422 Pfam NPH3 family 21 270 IPR027356 -
Alju11g0805 422 PANTHER OS12G0117600 PROTEIN 19 365 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0805 Alju-ChrAlju11 9599758 9601993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0805 17 292 EF-hand Containing Proteins AT3G44820 36.304 1.18e-49 176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0805 11 9599758 9601993 Alju05g1564 05 45895107 45897654 CCT
Alju11g0805 11 9599758 9601993 Alju11g0805 11 9599758 9601993 ECH