Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1564 ATGTTCAGTGAAACGAATAACCCGTTTCAGCCTGAGCAACCCATGATAACGAAATCGCCGTCGCATTTCACGACGGAATGCTGGTTCGACGACAAATGCATATTAGACGTGGACTACTTCGTCAAAACCCTCTCAGGCATTAAAGCGAAAGGCGTGCGTGCTGACCTAATTGGCTCCATCATCATCCACTACGCCTCCAAATGGCTCCCCGAAATCTCCGACGGAGGCGGCGGCTCCGACAAGCCCTCCCTCACTCAATTCCAAGAATCGCCTGAAAGCGTGACGGCTTCGTGGATGAAGAAGCGATTCTTCGTCGAAACGCTCGTCGGAGTTCTGCCGCCGGAGAAGGATTCGATCCCTTGCAATTTCCTGCTCCGTCTTCTGAGGACGGCGAATATGGTCGGCGTGGAGGTGAATTACAGGTCGGAGGTGGAGAAGAGGATATCGTGGCAGCTAGATCAGGCGTCGTTGAAGGAGATAATGATACCGTCTTTCAGTCACACGTGCGAGACGCTCTTAGATGTGGAGCTAGTGATAAGGTTGTTGAAGAGATTTGTGGGGTTAGATGTTGATGGAGGGAAAAGTGGGGTGGCTCTGATGAAGGTAGCTAAGTTGGTGGATGCTTACCTGGCGGAAGCCGCCGTGGACGCCAATCTGAGCTTATCGGAGTTCGTTGCACTCGCCGGAGCTCTTCCTCCACATTCCAGAGCTACAGATGATGGCTTGTATAGAGCTATTGACACTTATCTTAAAGCACATGCAGGGGTATCGAAGCAAGAAAGAAAAGGTCTATGTAAGCTGATAGATTGCAGGAAACTAACCCCAGAAGCCTCACTTCACGCAGCTCAGAACGAACGCTTACCTGTAAGAGCCGTGATCCAAGTCCTCTTCTCCGAGCAAACAAAGCTGAATCGCCACGTGGACTGGAGCGGCTCCTTCGGCGGAGGCATGAGAAGCCCCAACGGCGGCGGAGGCGATTTGCCGGGGAGGTCGTTCTCGAAGAGGGAGATGTACGCGCAGCAGATGGAGATAAGGAAGCTGAAGGAGGACTTGTACAGGCTTCAGAGCCAGTGCAGTGTGATGCAGGTTCAGATGGAGAGGATGATGATGGAGAAGAACAATAAGAAGGGTTTCTTCAAGTGGAAGAAGTTTGGGATTAGTGGGTTTGGTAAAAGTGTGAATGTTATGGCTTCTTCTTCTGTGGATCATCACAACATTCAAGAAGGGGTTGTTGAAGAAGAAGATGGGTTTGAAGTTACACAAACTCCTTTGGGCATGAAAACCAGATCGTCGTCCGTCAAACCTCGGACTCCTCATCACAAGCACTGGAGGAAATCTATGTCTTGA 1347 0.5071 MFSETNNPFQPEQPMITKSPSHFTTECWFDDKCILDVDYFVKTLSGIKAKGVRADLIGSIIIHYASKWLPEISDGGGGSDKPSLTQFQESPESVTASWMKKRFFVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVEVNYRSEVEKRISWQLDQASLKEIMIPSFSHTCETLLDVELVIRLLKRFVGLDVDGGKSGVALMKVAKLVDAYLAEAAVDANLSLSEFVALAGALPPHSRATDDGLYRAIDTYLKAHAGVSKQERKGLCKLIDCRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHVDWSGSFGGGMRSPNGGGGDLPGRSFSKREMYAQQMEIRKLKEDLYRLQSQCSVMQVQMERMMMEKNNKKGFFKWKKFGISGFGKSVNVMASSSVDHHNIQEGVVEEEDGFEVTQTPLGMKTRSSSVKPRTPHHKHWRKSMS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1564 448 Pfam NPH3 family 27 278 IPR027356 -
Alju05g1564 448 MobiDBLite consensus disorder prediction 433 448 - -
Alju05g1564 448 ProSiteProfiles NPH3 domain profile. 26 302 IPR027356 -
Alju05g1564 448 PANTHER OS12G0117600 PROTEIN 25 401 IPR043454 -
Alju05g1564 448 MobiDBLite consensus disorder prediction 412 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1564 Alju-ChrAlju05 45895107 45897654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1564 25 321 EF-hand Containing Proteins AT3G44820 34.688 3.75e-52 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0805 11 9599758 9601993 Alju05g1564 05 45895107 45897654 CCT
Alju05g1564 05 45895107 45897654 Alju05g1564 05 45895107 45897654 ECH