Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0786 ATGGAGTTAATTTCGGGTTTGCCTGATGATCTCGCGCTCGACTGTTTGATTCGCGTTTCGTATCAGCAGTTCCCGGCGGTCGCCGCCGTCTGCAAAGCCTGGAAGACTGAGATTCAGATGCCGGAGTTTCGCCGGAGAAGGAAAGAAGCAGGGCATGTCCAGAAGATCATCGTCATGGTTCAGGCAAGAGTTGACTTGGAGAATTCCCGGTCTGGAGCGATAAAAGGGGCGACAAACCCGGTTTACCGCCTGACAGTTTGTGAGCCGGAGACTGGTCTCTGGAGCGAGATGCCTCCGATTCCGGGTTTATCAGGCGGGTTGCCCATGTTCTGCCAGATTGCGGGTGTCGGGTTCGATCTGGTTGTGATGGGCGGGTGGGACCTGGATTCGTATAAGGCGTCGAACTCGGTGTTTGTGTATAACTTCGTATCGGGAAAGTGGCGCCGTGGGGCCGACCTGCCCGGTGGGTCCAGGACGTTCTTCGGCTGCGCGTCCGATAAGCGGCGGTTCGTGTACGTAGCCGGCGGGCACAGCGAGGACAAGACCGCGTTGAGGTCGGCGTTCGTTTATGACGTGGCAAGCGACGAGTGGGTCCCGCTGCCTCACATGGCAAGAGAGCGTGACGAGTGCAAGGCCATATTCCACAACGGGAAGTTTAGAATTATCGGAGGGTACTGCACGGAGAGGCAGGGACGGTTCGAGAGAACCGCAGAGGCCTTCGATGTTGCCACGTGGAAGTGGGACCCTGTGGAGGAGGAGTACCTAGATGTGGCCATGTGTCCGAGGACGTGCGTCGACGGCGGAGAGAAAGTGTACATGTGTGGCGCTGGTGGGGAGGTGATTGCTCGGCACAGCGACACGTGGCAGCCGATCGCCAAGTTGGGAGATGAGATCCGCAACGTTGCGCTCGTGACGCCGTGGGATGGGAAGGTGCTGTTGATAGGATCCAGTGCGTACAGTGAACCGCACGTGGGAATTGTATTGGACCTGAAAACCGGTAACTACAGAAAGTTGGAAATCCCTCCGAAGTACACAGGCCACGTTCAGTCCGGTTGTCTTCTAGAAATGTAA 1071 0.5714 MELISGLPDDLALDCLIRVSYQQFPAVAAVCKAWKTEIQMPEFRRRRKEAGHVQKIIVMVQARVDLENSRSGAIKGATNPVYRLTVCEPETGLWSEMPPIPGLSGGLPMFCQIAGVGFDLVVMGGWDLDSYKASNSVFVYNFVSGKWRRGADLPGGSRTFFGCASDKRRFVYVAGGHSEDKTALRSAFVYDVASDEWVPLPHMARERDECKAIFHNGKFRIIGGYCTERQGRFERTAEAFDVATWKWDPVEEEYLDVAMCPRTCVDGGEKVYMCGAGGEVIARHSDTWQPIAKLGDEIRNVALVTPWDGKVLLIGSSAYSEPHVGIVLDLKTGNYRKLEIPPKYTGHVQSGCLLEM 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0786 356 Gene3D - 31 343 IPR015915 GO:0005515
Alju11g0786 356 PANTHER OS02G0208700 PROTEIN 2 355 IPR044595 GO:0080037|GO:2000762
Alju11g0786 356 CDD F-box_AtAFR-like 3 47 - -
Alju11g0786 356 Pfam Kelch motif 171 203 IPR006652 GO:0005515
Alju11g0786 356 Pfam Kelch motif 120 154 IPR006652 GO:0005515
Alju11g0786 356 SUPERFAMILY Kelch motif 79 317 IPR015915 GO:0005515
Alju11g0786 356 SUPERFAMILY F-box domain 3 46 IPR036047 GO:0005515
Alju11g0786 356 SMART kelc_smart 170 217 IPR006652 GO:0005515
Alju11g0786 356 SMART kelc_smart 119 167 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0786 Alju-ChrAlju11 9278535 9279605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0786 4 200 EF-hand Containing Proteins AT4G39560 23.737 2.35e-07 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0786 11 9278535 9279605 Alju05g1601 05 46638486 46639466 CCT
Alju11g0786 11 9278535 9279605 Alju11g0786 11 9278535 9279605 ECH