Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1601 ATGGGTCTGATTTCGGGTCTACCGGACGATGTGGCCATGGACTGTTTGGTTCGGGTTTCCTACGATCAGTTCCCCACCGTTGCATCGGTTTGGAACGAGTTGCGACTGCCTCCGGGTTTCTCTGGCGGGTTACCCATGTTCTGTCAAATTGCGGGTGTTGGGTACGACTTGGTTTTGATTGGCGGGTGGGACCCAAACTCATGGAAGTCTTCAAACTCGGTATTTATTTATAACTTTATGTCGGATAAATGGCAACGTGGGGCCGACATGCCCGGCGGGCCCAGGACGTTCTTTGCCTGCGCGTCTGATTCCGAACGAGTAGTTTACATCGCCGGTGGGCACGACGACGAGAAGAACGAGTTGAGGTCGGCGTTAGCCTTTGACGTGGCAAGAGATAAGTGGGTCACACTTCCAGATATGGAAAGAGAGGGGGACGAGTGCAAGGCAGTTTTCCACCGTCAAAGCAGAAAGTTTCAGGTGATCGGCGGTTACTGCACGCAGATGCAAGGGCGGTTTGAGAGACGCGCCGAAGCCTTTGATGTTGCCACGTGCAAGTGGGACCCAGTAGACGAAGAGTTCCTGGGATCAGCCATGTGCCCGAGGACCTGCGTGGATGGTGGTGATGGAGGGAGAGTTTACATGTGCCGGGGTGGTGACGTGGTGGAATTAGAAGGCGACACATGGAAAGCGGTTTCGAAACTACCATGTGAGATACGGGAAGTGGCGTACATGAGTTCAGGGATTGAGGGAACGTTGTTGGTGATTGGATCAAGTGGTTATGCTGAACCATAG 792 0.5354 MGLISGLPDDVAMDCLVRVSYDQFPTVASVWNELRLPPGFSGGLPMFCQIAGVGYDLVLIGGWDPNSWKSSNSVFIYNFMSDKWQRGADMPGGPRTFFACASDSERVVYIAGGHDDEKNELRSALAFDVARDKWVTLPDMEREGDECKAVFHRQSRKFQVIGGYCTQMQGRFERRAEAFDVATCKWDPVDEEFLGSAMCPRTCVDGGDGGRVYMCRGGDVVELEGDTWKAVSKLPCEIREVAYMSSGIEGTLLVIGSSGYAEP 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1601 263 Gene3D - 19 233 IPR015915 GO:0005515
Alju05g1601 263 Pfam Kelch motif 107 140 IPR006652 GO:0005515
Alju05g1601 263 Pfam Kelch motif 51 91 IPR006652 GO:0005515
Alju05g1601 263 PANTHER OS02G0208700 PROTEIN 29 260 IPR044595 GO:0080037|GO:2000762
Alju05g1601 263 SMART kelc_smart 56 104 IPR006652 GO:0005515
Alju05g1601 263 SMART kelc_smart 107 154 IPR006652 GO:0005515
Alju05g1601 263 SUPERFAMILY Kelch motif 28 257 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1601 Alju-ChrAlju05 46638486 46639466 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0786 11 9278535 9279605 Alju05g1601 05 46638486 46639466 CCT
Alju05g1601 05 46638486 46639466 Alju05g1601 05 46638486 46639466 ECH