Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0701 ATGGAAATGGAAAGCAATATACCAATAATGAAGAGAGTGTGGAGCTTAGTTCGTGTGGCCTTCTTCATGTTGAGGAAAGGCATATCCAAGGGTAAGTTAATGACGGACCTAAACACGATGCTCAAGCGCCGCCGCAAAGTCGCCGGCAAAGTTATTTCCAACCTCATGTTTCACCACCACCACCACTACGACCCTCAGTTCTCCGGCCAGCGTGAGTACGAGTTCAGCTGCAGCAACACACCAAAAAACTTCTTCTTCCCCGTCGGCAGCGGTAAGCGCCACCGCCAGAGTCAATCGCATTTCTTTGCGTGTGCTCACGCGCCGCCCACCCAGGACGACGAAGTGGTGGTGAAGGCGGTGTTGGAGATACTGAACAATGAGGTTATTATGGCGGAGGCGTCGCCTGCCCTTCCCGGGTTTGGCCGGAGCCCCATGGTGCGGCAGCTGAGGGTGACGGACTCTCCATTCCCATTGCGAAACTCCGATGACGACGACCACCAGGTGGATAAGGCGGCCGAAGAGTTTATAAAGAAGTTTTATAAGGATCTGAAGAAGCAGACTTGA 564 0.5319 MEMESNIPIMKRVWSLVRVAFFMLRKGISKGKLMTDLNTMLKRRRKVAGKVISNLMFHHHHHYDPQFSGQREYEFSCSNTPKNFFFPVGSGKRHRQSQSHFFACAHAPPTQDDEVVVKAVLEILNNEVIMAEASPALPGFGRSPMVRQLRVTDSPFPLRNSDDDDHQVDKAAEEFIKKFYKDLKKQT 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0701 187 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 6 186 - -
Alju11g0701 187 Pfam Cotton fibre expressed protein 166 186 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0701 Alju-ChrAlju11 8399481 8400044 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0701 11 8399481 8400044 Alju05g1715 05 48368357 48368971 CCT
Alju05g1715 05 48368357 48368971 Alju11g0701 11 8399481 8400044 ECH
Alju02g2885 02 43284109 43284726 Alju11g0701 11 8399481 8400044 ECH
Alju11g0701 11 8399481 8400044 Alju11g0701 11 8399481 8400044 ECH