Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1715 ATGGAGAGCAACGTACCAGAAATAGCCAAGAGAGTGTGGAACATGGTTCGTGTTGCCTACTTCATGCTCAGAAAAGGCATATCTAAAGGCAAAATTATGATGGATCTCAACATGATGCTCAAACGCCGCGGCAAGCTCGCCGGAAAGGCCATCTCCAACCTCATGTTCCACCACCACGGAAGCTCCACCTCCTCCGGAAACCCCCACCTCCAGTTCTCCACCGGACGAGAGTACGAGTTCAGCTGCAGCAACACTCCCAACTTCACCTTCTTCCCAAAGCGCCACCACCGCCACAACCACAATCCCTTCTTCTTCTCGTGTGCTCACGCGCCACTCACTCAGGACGACGACATGGTGGCTGTCGGTAATGCGCTCAAGGAGGCGTTGGAGATGTTAGATAACAACAATGCTTCTAACAATAACTATAACAGGGATATGGTGGAGGCATCGCCGGCGCTCCCCGGGTTTGGGAGGAGTCCGAAGGTGAGGCAGCTGAGGGTGACGGACTCACCCTTCCCGGTTCAAGATGGCGACGCCAACAGGGATCATCAGGTGGACAAGGCGGCGGAGGAGTTTATAGAAAGGTTTTACAAGGACCTGAAGAAGCAAGTTTGA 615 0.535 MESNVPEIAKRVWNMVRVAYFMLRKGISKGKIMMDLNMMLKRRGKLAGKAISNLMFHHHGSSTSSGNPHLQFSTGREYEFSCSNTPNFTFFPKRHHRHNHNPFFFSCAHAPLTQDDDMVAVGNALKEALEMLDNNNASNNNYNRDMVEASPALPGFGRSPKVRQLRVTDSPFPVQDGDANRDHQVDKAAEEFIERFYKDLKKQV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1715 204 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 7 203 - -
Alju05g1715 204 Pfam Cotton fibre expressed protein 183 203 IPR008480 -
Alju05g1715 204 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1715 Alju-ChrAlju05 48368357 48368971 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0701 11 8399481 8400044 Alju05g1715 05 48368357 48368971 CCT
Alju05g1715 05 48368357 48368971 Alju11g0701 11 8399481 8400044 ECH
Alju02g2885 02 43284109 43284726 Alju05g1715 05 48368357 48368971 ECH
Alju05g1715 05 48368357 48368971 Alju05g1715 05 48368357 48368971 ECH