Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0523 ATGAACTCGGCTGCACCGAATCATTCCCTTTGTTCATTACAGGGAGCCGCCAGTGTTCCATCCCTGCTTCTTGGTTCAGCTTATACTGTCATCAAGAATTCGGGTATTGATCAATCTTCTACAGGTGGTTTTGGAATTGAAGGCTTATTGAGCAGATCTGATCATAGAGGTCAGAAGGCCTGCTACTTGAGGATGAATTTGCAACAAGTTGGGCAGTCTAGATCCTCTAATGGATATGGCCGTCGAAAATCTGAAAGAGAAGGGGCAGCCAAGTCAGAGGATAAGATCTCGTCTGGGAAGTCAAATGCCAACAGACTGGCAGGTATAGTGACTGGCAATATAGGTGACGGTCCTTCACATGATCGACTAGTATATGTTACAACATGTCTTATTGGGCAGCAAGTGGAGGTGCATGTGAAAAATGGATCTATATACTCTGGAATATTTCATGCAAAAAATACTGAGAAAGATTTTGGAATCATTTTAAAGATGGCTCGCTTGACAAAGGATGGTTCATTGCGAGGGCAGAAGTCTGGTATAGAATCAGTCAGCAAGGCTCCTTCAAAGACTTTAATTATACCTGGCAAAGAATTTGTACAAGTCATAGCAAAGGGCGTTGCTGTAACCAGGGATGGCCTACCTAATGAAGCTCACCATGAAATGTATCAGGACATCATTGTTGATTCAGTAATATCACAATCACGCCATGTCGACTTGGAGAGAGAACTACAACCATGGGTGCCTGCTGAAGATGATCCACAATGCCCTGAGCTAGAAAATATTTTCGGTGAAACTTGGAATAGGGGCTGGGATCAGTTTGAAACAAACAAAGCATTGTTTGGTGTAAAAAGTACGTTCAATGAGGAACTTTATACCACAAAGATTGAGAAAGGCCCTCAGACAAGAGAGTTGGAAAAGCAAGCTTTAAGAATAGCTAGAGAAATCGAAGGTGAAGATACCCAAGATCTTCACCTGGCAGAGGAAAGAGGCCTTTATCTAAATAAGAATTTTGATATCGACGAAGAGACTAGATTCTCTTCAGTCTATAGGGATAAAGGGGTTGATGACAGTGGCTATGATGAGAATGAGGATACTCTGTTGGACTCACACAATTCTGAAACCTTTGGAGATACATCTGCTTTTGTTGTTATGAGATCTGGTGAATCAAGTGATGGAAAAGATGATGATGGAGTTAGAAAATCAAATTCATCCTCTAAGGATTTATCACAATCATCTCAGTCAAGTAATGGTGTGGGTTTAGGCCGTGCTGGTTCTCATAATCTTGCTAATGAGCTAGCATCTGAACTCACTGCAAAAAGTGAACCTACTTCAGATGCTGAATGCAGGGTTCTGGGGAACTCACTTACTGATCTGCATGCAGCCATTGACAGGAGCAAGGAAGAAAATCAGATAGAATCTGAGGATGTTCAACCATCAAAATCCAAGGATTTACAGTCATCACACAACTTGAAGAAAGACGAACCTAATACTGGGGTATTGTCTTCAAACGCTGTCTCTCATACCCCTTCATCTCATATTTCATCGAAGACACGTGAGAAGACAGGTTTGCCTGTTGATTTGATTGAGGGTCCAACATCTGAGAAAGATAAAGGGCAAACAAATTCTCTAAAATCCTCTGGAGTAACTGCCAGTTCTACATCAACTCGTACAGATTGTGTGAAAGGTGTTGCAGCATCTTCTGGTCCTGGCCCATCACCAAGTTCTTCTGTTGGTTCATCATCTTCTGAAAAATCAACACTGAATCCGAACGCAAAGGAATTCAAGCTCAATCCAAATGCAAAGAGTTTCGTTCCATCCCAATCACCAGTTAGGCCTCCCTCACAGGTTTCGGATGGCTCCTTCTATTACCCAACTAATGTAACTACTGTACCCCATATGCCTGCCATGCCCATGGAACTTGGAATGGGACACGCATTTGCCGGGGTGCAACCTGTCCTGTATAATCCACAAGTAGCACAAATGTCATCCCAAGCATATTTTCATCCAAATGGACCACAGTACGGACATCTGGTTGGTCATCCTAGGCAAGCTTTGTACGTGCCAGGTTATTTACCTGAAACACCGTATAAGGGACGGGATTACTAA 2106 0.4264 MNSAAPNHSLCSLQGAASVPSLLLGSAYTVIKNSGIDQSSTGGFGIEGLLSRSDHRGQKACYLRMNLQQVGQSRSSNGYGRRKSEREGAAKSEDKISSGKSNANRLAGIVTGNIGDGPSHDRLVYVTTCLIGQQVEVHVKNGSIYSGIFHAKNTEKDFGIILKMARLTKDGSLRGQKSGIESVSKAPSKTLIIPGKEFVQVIAKGVAVTRDGLPNEAHHEMYQDIIVDSVISQSRHVDLERELQPWVPAEDDPQCPELENIFGETWNRGWDQFETNKALFGVKSTFNEELYTTKIEKGPQTRELEKQALRIAREIEGEDTQDLHLAEERGLYLNKNFDIDEETRFSSVYRDKGVDDSGYDENEDTLLDSHNSETFGDTSAFVVMRSGESSDGKDDDGVRKSNSSSKDLSQSSQSSNGVGLGRAGSHNLANELASELTAKSEPTSDAECRVLGNSLTDLHAAIDRSKEENQIESEDVQPSKSKDLQSSHNLKKDEPNTGVLSSNAVSHTPSSHISSKTREKTGLPVDLIEGPTSEKDKGQTNSLKSSGVTASSTSTRTDCVKGVAASSGPGPSPSSSVGSSSSEKSTLNPNAKEFKLNPNAKSFVPSQSPVRPPSQVSDGSFYYPTNVTTVPHMPAMPMELGMGHAFAGVQPVLYNPQVAQMSSQAYFHPNGPQYGHLVGHPRQALYVPGYLPETPYKGRDY 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0523 701 Pfam Ataxin 2 SM domain 120 204 IPR025852 -
Alju11g0523 701 MobiDBLite consensus disorder prediction 79 94 - -
Alju11g0523 701 MobiDBLite consensus disorder prediction 351 370 - -
Alju11g0523 701 MobiDBLite consensus disorder prediction 386 424 - -
Alju11g0523 701 SMART LsmAD_2 280 351 IPR009604 -
Alju11g0523 701 MobiDBLite consensus disorder prediction 462 490 - -
Alju11g0523 701 MobiDBLite consensus disorder prediction 72 100 - -
Alju11g0523 701 MobiDBLite consensus disorder prediction 568 617 - -
Alju11g0523 701 MobiDBLite consensus disorder prediction 403 421 - -
Alju11g0523 701 MobiDBLite consensus disorder prediction 388 402 - -
Alju11g0523 701 Pfam Ataxin-2 C-terminal region 583 594 IPR009818 -
Alju11g0523 701 MobiDBLite consensus disorder prediction 491 518 - -
Alju11g0523 701 PANTHER ATAXIN 2-RELATED 90 692 IPR045117 GO:0003723
Alju11g0523 701 Pfam LsmAD domain 280 350 IPR009604 -
Alju11g0523 701 MobiDBLite consensus disorder prediction 462 617 - -
Alju11g0523 701 MobiDBLite consensus disorder prediction 534 561 - -
Alju11g0523 701 MobiDBLite consensus disorder prediction 351 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0523 Alju-ChrAlju11 5633390 5642445 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0523 11 5633390 5642445 Alju05g1900 05 51364751 51374537 CCT
Alju11g0523 11 5633390 5642445 Alju11g0523 11 5633390 5642445 ECH