Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0884 ATGAGGAAAGATGACCAGAAACTACATCAGGGAGGCGCAATGCCTCGGTCAGGGCGAACCAATGGATTAATTCCGAGCTCTTTTCGTGCTCTCTCAAGCTACCTGAGGGTCGTTTCCTCTGGTGCTTCCACTGTTGCGCGGTCTGCAGCATCGGTTGCTTCTTCGATTCTTGATAGGGATAGTGACGCTGACCATGATCTGGTTATCTGGGCTGGGTTTGACAAGTTAGAGGTGGAAGGAGATGACATCCGACAAGTTCTTCTTTTATGCTATCGAACTGGGTTCCAGGTTTGGGATGTTGAAGATTCCAAAAATGTGCGTGACCTGGCTTCCAGACATGATGGTCCTATTTCTTTTATGCAAATGCTATCAAATCCAATTGCATCAAAGAGATCAGAAGATAAGTTTGCAGACAGCCGTCCACTGTTGGTTCTTTGTACTGATGGAATTTATGCTGGAGGCAGTAACAATAAGAATGGTTTTGCCTCCCATTGCAATGGGAGCACTTTAAACTGCCATGACCAAGTGAATGGCCTTTATCTGCCAACTACTGTTCAGTTTTATTCTTTGAGATCCCAATCATATGTAGATGTATTAAAGCTTAGATCAGCTATATATTCTGTTAGGTGCAGTTCTCGTGTTGTTGCTGTTGCTCAATCCACTCAGATACACTGTTTCAGTGCCACTACATTAGAAAGGGAATATACTCTGCTTACCAATCCAATTGTCATGAGCTGTCCTGTTTCTGGGGGTATAGGTTATGGACCACTGTCGGTCGGTCCTAGATGGCTGGCTTATAGCGGAAGCCCAGTTGTAGTCTCAAATTCTGGGCGTGTCAATCCTCAACATTTGACACCTTCTGCAAGCTTTCCTAGTTTTTCTTCGAACGGTAGCTTGGTTGCACACTATGCCACAGAGTCCAGCAAGCAACTTGCTGCGGGGATAGTCACACTTGGAGATATAGGGTATAAGAAGCTTTCTAGGTACTGCTCTGAGCTACGACCTGATGGCAATGGTTCTTCACCATCTGTAAATTCCAGCTGGAAGGGCAATGGAATCAGTAATGGCCATTTGGGGGATTTGGATAATATTGGAATGGTTATTGTCAAAGACATTGATAGTAAGGACGTTGTTGCTCAATTCCGAGCCCATAAAAGTCCTATTTCAGCCTTATGCTTTGACCCTAGTGGCACTATGTTAGTGACTGCATCAGTTCAGGGCCATAACATTAATGTTTTTAAGATAATGCCTGGACACTCCGACAGTTTAGCATCTGATGGCAGTCCTACACATGTTCATCTTTACAGGCTACAACGTGGCTTTACAAATGCAGTAATTCAAGATATCAGTTTCAGTGATGACAGCAACTGGATTATGGTTAGTTCCTCAAGAGGTACTAGCCATTTGTTTGCCATAAATCCTCTGGGAGGATCTGTAAATATTCAGTCCTACGATGCAAGTTTTACATCCAAAAATGGTAGATTGGGTGTTATGACTGACCCAACAGTTCGGTGGCCTCCTAATTCAAGCTTACAAATTCCTGAACAACAAAGTTTGTGTGCAGCTGGGCTGCCAATCACACTTTCTGTTGTATGCAGAATTAGAAATGGAAATAATGGCTGGAGAAGCACTGTAAGTGGTGCAGCCGCTGCTGCGACAGGTAGGACAAGCTTCCAGTCTGGAGTTATTGCTTCATCTTTTTGTAACGGCAAAGGGAGTGCATTGTATGTTGATGGGAACCTTATAAGGACAAAATATCTCTTGTTGGTTTTTTCATCCGCTGGTTCTATGATACAATATGCTCTGGGCAAATCAATGGGTGAAGATTCAGTTGTTTCTGGATTAACCCAGGCGCATGAACCTGCATTAGAGGTTGACTCAAGGTTGGTTGTTGAGGCTATTCAGAAATGGAATATATGCCAGAGACACACTCGAAGAGAACGAGAAGATAATGTAGACATATATGGTGAAAATGGAACTTTGGACAGCAACAAAATATATCCTCTAGAGATGAAGGATGAGAATATCAATAACTCAAAACTTGAGAATGTAATCATGAAAGTGAATTCTCATCCTAAGGAAGAGCGTCATTTTTCAGGAGCAGAACTTAAGACCCATCAAGCTCAAACTCCATTGTGGGCGAAGCGAGAGATATATTTTCATTCAATGGTGAAAGAGGAAGGCATATTGAGTGAAGAAACTGCTTCAGGAGGGGAAATTGAGATTGAAAATATTTCAACGCATGTAATTGAAGTTAGGGCCAAGAACTTAGTTCCAATTGTTGATTATCTTCAGCCACAAAATTCTCAAGAAACAAGGACTCCTGCTGTAAATAGTGAAATAAATGAACCACTGCTACATCTGAATTCTGGGATTCATGAAAAAGACACAATTTCAGAGAGAGGTAACTCAGACTCTAATGACAGCGATGTTGAAGGGGTGGAGTGGAATGATCATCGAGGATCACTGGAAACTAACGGCTTTGTAAATAAGAATGACAATGACAATGACACCCTGGTAGCCAATACTTGCCATGAGGTTGTAAATAATAGAGAGCACTCAAACATGGAGGCTCAACTCATGCCTGTAAATAGTGACAAAGAAGGCGTGAAAATGGAGAATCACTTTGAAGAAGACAGCTTGAATTAA 2649 0.4228 MRKDDQKLHQGGAMPRSGRTNGLIPSSFRALSSYLRVVSSGASTVARSAASVASSILDRDSDADHDLVIWAGFDKLEVEGDDIRQVLLLCYRTGFQVWDVEDSKNVRDLASRHDGPISFMQMLSNPIASKRSEDKFADSRPLLVLCTDGIYAGGSNNKNGFASHCNGSTLNCHDQVNGLYLPTTVQFYSLRSQSYVDVLKLRSAIYSVRCSSRVVAVAQSTQIHCFSATTLEREYTLLTNPIVMSCPVSGGIGYGPLSVGPRWLAYSGSPVVVSNSGRVNPQHLTPSASFPSFSSNGSLVAHYATESSKQLAAGIVTLGDIGYKKLSRYCSELRPDGNGSSPSVNSSWKGNGISNGHLGDLDNIGMVIVKDIDSKDVVAQFRAHKSPISALCFDPSGTMLVTASVQGHNINVFKIMPGHSDSLASDGSPTHVHLYRLQRGFTNAVIQDISFSDDSNWIMVSSSRGTSHLFAINPLGGSVNIQSYDASFTSKNGRLGVMTDPTVRWPPNSSLQIPEQQSLCAAGLPITLSVVCRIRNGNNGWRSTVSGAAAAATGRTSFQSGVIASSFCNGKGSALYVDGNLIRTKYLLLVFSSAGSMIQYALGKSMGEDSVVSGLTQAHEPALEVDSRLVVEAIQKWNICQRHTRREREDNVDIYGENGTLDSNKIYPLEMKDENINNSKLENVIMKVNSHPKEERHFSGAELKTHQAQTPLWAKREIYFHSMVKEEGILSEETASGGEIEIENISTHVIEVRAKNLVPIVDYLQPQNSQETRTPAVNSEINEPLLHLNSGIHEKDTISERGNSDSNDSDVEGVEWNDHRGSLETNGFVNKNDNDNDTLVANTCHEVVNNREHSNMEAQLMPVNSDKEGVKMENHFEEDSLN 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0884 882 MobiDBLite consensus disorder prediction 1 21 - -
Alju10g0884 882 FunFam Breast carcinoma-amplified sequence 3 293 523 - -
Alju10g0884 882 Gene3D - 354 506 IPR015943 GO:0005515
Alju10g0884 882 Pfam Breast carcinoma amplified sequence 3 525 759 IPR022175 -
Alju10g0884 882 SUPERFAMILY WD40 repeat-like 86 473 IPR036322 GO:0005515
Alju10g0884 882 SMART WD40_4 430 471 IPR001680 GO:0005515
Alju10g0884 882 SMART WD40_4 374 414 IPR001680 GO:0005515
Alju10g0884 882 MobiDBLite consensus disorder prediction 795 834 - -
Alju10g0884 882 MobiDBLite consensus disorder prediction 795 819 - -
Alju10g0884 882 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 17 829 IPR045142 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0884 Alju-ChrAlju10 8088647 8093470 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0641 02 4704332 4709653 Alju10g0884 10 8088647 8093470 CCT
Alju10g0884 10 8088647 8093470 Alju10g0884 10 8088647 8093470 ECH