Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0641 ATGGCGAGGGAGGTTGCTATATTTCATCTCTTTGGTTTTGGGATGATGAATGATGATCAGAAACCGCAGCAAGCCGGCGGTGTTCGGTCCGGTCGGACCAATGGGTTTTTTCCCAGCTCGCTCCGGGCTATCTCCAGCTACCTCAGGGTTGTTTCCTCCGGTGCTTCCAACGTTGCTCGGTCGGCAGCATCAGTTGCGTCCTCGATTGTGGATAGGGATGATGACGCCAATTCTGATCAGGTCATCTGGGCTGGTTTTGATAAATTAGAGGGCGAGCGAGAAGTCACCCGTCAAGTTCTACTTCTAGGATTTCGGTCTGGCTTCCAGGTTTGGGATGTTGAAGATTCACACAATGTACATGACCTAGTTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGTTGCCAAATCCAATTGCATCAAAGAGATCAGCAGGAAAGTTTGCTAACAGCCGCCCACTGCTAGCTGTGTGTGCTGATGGTTTCTTTGCTGGAGGCAGTAACGTTCAGGATGGACTGACCACCCCTTACAATGGGAGCACTTCCAATTTCCATGAGCAATTGAATGGAAATTATCTGCCAACGACTGTTCAGTTTTATTCCATGAGATCCCAATCATATGTCCATGCACTAAAATTTAGATCAGTTGTTTATACTGTAAGGTGCAGTTCTCGAATAGTTGCTGTTTCTCAATCAACTCAGATACATTGTTTTGATGCTGCAACATTAGAAAGAGAGTATACTATACTTACCAATCCTATAGTTGCAAGTTGTCCTGGTTCTGGAGGTGTAGGCTATGGACCACTTGCAGTGGGTTCAAGATGGCTGGCTTATAGTGGAAGTCCAGTCGCAATATCTAATTCTGGCCATGTCAATCTGCAAGACTTGACAAATTCAGAAAGCTTTCCTGGTTTTTCTTCAAATGGGAGCTTGGTTGCACACTATGCCAAAGAATCAAGCAAGCAACTTGCTTCTGGAATTGTGTCCCTTGGAGATATGGGGTATAGGAAACTTTCCAGATACTACTCTGAGCTTCTGTCTGATAGCAATAGTCCATTACGATCTTTAAATTCAGGTTGGAAGGGCAATGGAACCATTAATGGACATTCAGCGGATGCTGACAACATTGGAATGGTCATTGTAAAGGATATTGTCAGTAAAAATGTAGTTACTCAAATGCGAGCCCACAAAAGTCCTATTTCAGCCTTACGCTTTGATCCCAGTGGAACCATTTTGGTGACTGCTTCAGTTCAGGGGCATAGTATAAATGTATATAAGATAATGCCCTGTCACTCAGAGGCACGTGATACCAGCCCTTCTAATGTTCATCTCTACAAGTTGCAGCGTGGCTATACAAATGCTATAATACAAGATATTAGTTTCAGCGATGACAGCAATTGGATTATGATAAGTTCCTCTAGGGGCACTAGCCATCTATTTGCTATAAATCCTCAGGGAGGAGCTGTGGATATTCAAGCCCTTGATTGTAGTCTTCCAACACAAAATAACAGACTGGGTGGTATTACTAGTCAAGGAGTCCTATATCCTCCTAGTTCGGCCTTGCAAATGCATAAAAAGCAGAGCCTATGTGCAACTGGCCCACCAATCACTCTTTCTGTTGTTAGCAGAATTAGGAATGGAACTAATGGCTGGAGAGGTTCTGTGAACGGTGCTGCTGCAGCTGCCACAGGTAAGACGAGTTCCCTTTCTGGGGCTATTGCTTCATCTTTCTGTAAGGGCAGTGGCATGTATAATGATGGGAAGCATTCCAAGACCAAGTATCACTTGTTGGTTTTTTCATCCTCTGGTTCTATGATACAATATGCTCTGCGGATGTTAAATGGTCTAGATTCAGCTTTTGTTTCTGGATTAAACCCTGCTTACGAATTAGCTCCACAAGTTGATGCAAGATTAGTAGTGGAAGCTATTAAAAAATGGAGTATATGTCAAAGACTAAGTTTGCAGGAGCGAGAAGATAACATTGACATATATGGTGATAATGGAATTCCTGACGGCAATAAAATTTATCCTGAAGAATCCAAAGAGGACACTGTCAATAGCCCAAAATTCAAGAATGAAGTGGTCAAAGTATATTCCTCTACAGAGGACGATCGTCATCTGTTTATTTCCCAAGCTGAACTGCAGATGCACCAAACTCAGACTCCATTGTGGGCAAAGTCTGAGATATATTTTCATTCAATGGTGAAAGAAGCTACCATAATAGATGAAGCAGCTGCTGCAGGAGGGGAATTTGAGATTGAAAGGATTCCAACTCGCATGATTCAAGCTAGGTCAAAACACTTAATTCCTGTTGTTGACTATCTTCAGACCCCAAAAGTCCAACAAACAAGGGCCTATGCTCTGGATGGCAGGACTGCACAACAAACTCTACTGAATTGGACAATGGCATTCAAGTACCTGGGTTGGGTGATCATCTTCTGCCAACAAGAGCAAGAGTCTATGTAA 2469 0.4318 MAREVAIFHLFGFGMMNDDQKPQQAGGVRSGRTNGFFPSSLRAISSYLRVVSSGASNVARSAASVASSIVDRDDDANSDQVIWAGFDKLEGEREVTRQVLLLGFRSGFQVWDVEDSHNVHDLVSRHDGPVSFMQMLPNPIASKRSAGKFANSRPLLAVCADGFFAGGSNVQDGLTTPYNGSTSNFHEQLNGNYLPTTVQFYSMRSQSYVHALKFRSVVYTVRCSSRIVAVSQSTQIHCFDAATLEREYTILTNPIVASCPGSGGVGYGPLAVGSRWLAYSGSPVAISNSGHVNLQDLTNSESFPGFSSNGSLVAHYAKESSKQLASGIVSLGDMGYRKLSRYYSELLSDSNSPLRSLNSGWKGNGTINGHSADADNIGMVIVKDIVSKNVVTQMRAHKSPISALRFDPSGTILVTASVQGHSINVYKIMPCHSEARDTSPSNVHLYKLQRGYTNAIIQDISFSDDSNWIMISSSRGTSHLFAINPQGGAVDIQALDCSLPTQNNRLGGITSQGVLYPPSSALQMHKKQSLCATGPPITLSVVSRIRNGTNGWRGSVNGAAAAATGKTSSLSGAIASSFCKGSGMYNDGKHSKTKYHLLVFSSSGSMIQYALRMLNGLDSAFVSGLNPAYELAPQVDARLVVEAIKKWSICQRLSLQEREDNIDIYGDNGIPDGNKIYPEESKEDTVNSPKFKNEVVKVYSSTEDDRHLFISQAELQMHQTQTPLWAKSEIYFHSMVKEATIIDEAAAAGGEFEIERIPTRMIQARSKHLIPVVDYLQTPKVQQTRAYALDGRTAQQTLLNWTMAFKYLGWVIIFCQQEQESM 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0641 822 Pfam Breast carcinoma amplified sequence 3 534 771 IPR022175 -
Alju02g0641 822 Gene3D - 95 534 IPR015943 GO:0005515
Alju02g0641 822 SMART WD40_4 387 427 IPR001680 GO:0005515
Alju02g0641 822 SMART WD40_4 205 240 IPR001680 GO:0005515
Alju02g0641 822 SMART WD40_4 441 482 IPR001680 GO:0005515
Alju02g0641 822 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 30 790 IPR045142 GO:0006914
Alju02g0641 822 SUPERFAMILY WD40 repeat-like 107 484 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0641 Alju-ChrAlju02 4704332 4709653 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0641 02 4704332 4709653 Alju10g0884 10 8088647 8093470 CCT
Alju02g0641 02 4704332 4709653 Alju02g0641 02 4704332 4709653 ECH