Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0661 ATGGCCGCTGTTACTTCTGTGTCCTTCTCCGCATTAACCCAATGTTCTGAAAGAAAGCCTGCTTTCTCTTCCACTCGCTTCCTCGGATTCAATTCGGAAGCATTACGGTTTCGGACGAATATTTCTTACCACTATGCTGCTGTTGGAGCTTCCAATTCCCCTTCTAAAATGATTATTCAATGCATGTCTTCTGCCGCAGATGTTCCCACTGTATCTGAGACAAAATATAATTTCCTCAAAGCATATAAACGACCGATCCCTAGTATCTACAACACTGTGCTGCAGGAGCTCATTGTTCAGCAGCATTTAATGAGATACAAGAGATCATACCGTTACGATCCTGTATTTGCTCTTGGTTTTGTCACTGTGTACGATCAACTCATGGATGGGTATCCTAGTGATGAAGATCGAGATGTCATCTTCCAGGCATATATCAAGGCATTGAAGGAAGAGCCAGAACAATATAGAAAAGATGCACAGAAGTTGGAAGAGTGGGCGCGGGCTCAGAATCCAAATTCCCTAGTTGAGTTTTCTTCCAGGGAAGGAGAGGTGGAAGGGATATTAAAGGATATTGCAGAAAGAGCAGGTGGAAAGGGGGATTTCAGTTATAGTCGTTTCTTTGCAGTAGGCCTTTTTCGACTTCTTGAGTTGGCAAATGCAACAGAACCGGCCATTTTGGAGAAGCTTTGTGCAGCTTTGAACATCAATAAGAGAAGTGTTGATCGGGATTTGGATGTGTACCGTAATCTGCTTTCCAAGTTGGTCCAGGCTAAAGAGCTGCTAAGGGAGTATGTTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGACTGAATCTCAAAAGGCTAATGAGGCCATTTCAACTTGTTTGGGACAAAGGATCAATTCTCTGGCCTCTAGACAGTAA 903 0.433 MAAVTSVSFSALTQCSERKPAFSSTRFLGFNSEALRFRTNISYHYAAVGASNSPSKMIIQCMSSAADVPTVSETKYNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDPVFALGFVTVYDQLMDGYPSDEDRDVIFQAYIKALKEEPEQYRKDAQKLEEWARAQNPNSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANATEPAILEKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLREYVDREKKKREERTESQKANEAISTCLGQRINSLASRQ 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0661 300 Coils Coil 247 277 - -
Alju10g0661 300 Hamap Protein Thf1 [thf1]. 65 273 IPR017499 GO:0010207|GO:0015979
Alju10g0661 300 NCBIfam photosystem II biogenesis protein Psp29 68 272 IPR017499 GO:0010207|GO:0015979
Alju10g0661 300 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 293 IPR017499 GO:0010207|GO:0015979
Alju10g0661 300 Pfam Thylakoid formation protein 70 275 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0661 Alju-ChrAlju10 5569280 5572534 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0474 02 3490199 3493438 Alju10g0661 10 5569280 5572534 CCT
Alju10g0661 10 5569280 5572534 Alju10g0661 10 5569280 5572534 ECH