Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0474 ATGGCGACCATTACTTGTGTGTCTTTCTCAGCATTAACTCAATGTTCTGTAAGAAAAGCGACTACACCTTCGACTTGTTTCCTGGGGTCGAACTCCAACGTCTTTCGGCTGCGGATGAATTCTGCATATCATTGTGTCGGTACTCGAGCTTTGAATCCCACTCCCAAAATGGTTGTTCAATGCACGTCTTCTGTGACAGACATCACCCCTGTTTCTGAGACAAAGTTAAATTTCCTCAAGGCGTATAAGCGACCAATCCCTAGTATCTACAACACTCTGCTGCAGGAGCTCCTTGTCCAGCAACATTTAATGAGATATAAGAGATCATACCGCTATGACCCCATATTTGCTCTTGGATTTGTCACTGTATATGATCAGCTCATGGAAGGATATCCTAGTGATGAGGATCGAGATGCCATCTTCAAAGCATACATTGAGGCATTGAAAGAAGATCCAACCCAATACAGAGTAGATGCACAGAAGTTGGAAGAGTGGGCTCGGACTCAAAATCCTACTTCCCTGGTTGATTTTTTGTCCAGAGAAGGAGAAGTTGAGGGAATATTGAAGGATATTGCAGAAAGAGCAGGGGGAAATGGGGCTTTTAGCTATAGTCGTTTCTTTGCCGTAGGCCTCTTTCGTTTACTTGAATTGGTAAATGCAACCGAACCAACAATTTTGGAAAAGCTTTGTGTGGCTTTAAACATTAACAAAAGAAGTGTAGATCGGGATTTGGATGTGTACCGCAATCTGCTTTCCAAGTTGGTACAGGCAAAAGAGCTGTTGAAGGAATATGTTGACAGGGAGAAGAAGAAAAGAGAGGAAAGGGCTGAATCAAAAAAGGCTAACGAGGCAATCAAAACATGA 864 0.4282 MATITCVSFSALTQCSVRKATTPSTCFLGSNSNVFRLRMNSAYHCVGTRALNPTPKMVVQCTSSVTDITPVSETKLNFLKAYKRPIPSIYNTLLQELLVQQHLMRYKRSYRYDPIFALGFVTVYDQLMEGYPSDEDRDAIFKAYIEALKEDPTQYRVDAQKLEEWARTQNPTSLVDFLSREGEVEGILKDIAERAGGNGAFSYSRFFAVGLFRLLELVNATEPTILEKLCVALNINKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAESKKANEAIKT 287
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0474 287 Coils Coil 247 277 - -
Alju02g0474 287 Hamap Protein Thf1 [thf1]. 65 273 IPR017499 GO:0010207|GO:0015979
Alju02g0474 287 NCBIfam photosystem II biogenesis protein Psp29 68 272 IPR017499 GO:0010207|GO:0015979
Alju02g0474 287 Pfam Thylakoid formation protein 71 275 IPR017499 GO:0010207|GO:0015979
Alju02g0474 287 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 286 IPR017499 GO:0010207|GO:0015979
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju02g0474 Alju-ChrAlju02 3490199 3493438 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0474 02 3490199 3493438 Alju10g0661 10 5569280 5572534 CCT
Alju02g0474 02 3490199 3493438 Alju02g0474 02 3490199 3493438 ECH