Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g0187 ATGGATGGTAGATCGGTAGGTCTTTGTAGTTTCTTTTCTGAAAAAATATTCTTAGCATTTAGTGATTTCTTCAAATGTGCATCTCTTCGTCTATATAAATGGTATCTCATTAAAGAGTCTTCAAATGAGAAATCAGAAGGGAAATTTAGGGTTTTGGTTTGGTTCTCCCTGAAGCTCGCGATCAGGATCCGAACAATGGCAGCCAATTCTTCCAATGGGGATCACCAAACACCGACAAAGTCACCGCCTTTGCCATCTCCATTGCGTTTTTCCAAATTCTTTCAGTCCAATATGAGAATTTTGGTTACTGGAGGAGCTGGATTTATTGGCTCTCACCTGGTGGACAGATTGATGGAAAATGAAAAAAATGAGGTAATAGTTGTTGATAACTACTTCACTGGATCCAAAGACAATCTCAAAAAATGGATTGGCCATCCAAGATTCGAGCTCAAGCGTCATGATGTCACAGAGCCTTTGTTGGTTGAAGTTGATCAGATTTACCATCTTGCATGTCCAGCTTCTCCTATCTTCTACAAATACAATCCTGTGAAGACAATAAAGACAAATGTGATTGGTACGCTGAACATGCTAGGGCTTGCAAAACGAGTTGGTGCAAGGATTTTGCTTACATCAACATCAGAAGTATATGGAGACCCTCTTGTGCACCCACAGCCTGAAACCTATTGGGGCAATGTTAATCCCATAGGGGTCCGGAGCTGCTATGATGAGGGAAAGCGTGTGGCTGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATTGAAATACGTGTTGCAAGAATCTTTAACACATATGGACCACGCATGAATATTGATGATGGGCGTGTTGTTAGCAACTTCATTGCACAGGCACTTCGGGGTGAACCATTGACGGTCCAATCTCCTGGAACACAAACTCGCAGTTTCTGTTATGTCTCTGACCTGGTCGACGGCCTTATCCGTCTCATGGAAGGGGACCACACTGGTCCAATCAATCTTGGAAACCCAGGTGAATTTACAATGACTGAACTCGCTGAGACGGTGAAAGAGCTTATCAATCCGAAGGTGGAAATAAAGACGGTAGAGAATACTCCCGATGACCCTCGACAGAGAAAACCTGATATAACGCAGGCAAAGGAATTGCTTGGTTGGGAACCCAAGGTCAAGTTGCGGGATGGCCTTCCCCTAATGGAAGAGGATTTCCGTCTCAGGCTTGGAGTTGATAAGAACTAA 1233 0.4331 MDGRSVGLCSFFSEKIFLAFSDFFKCASLRLYKWYLIKESSNEKSEGKFRVLVWFSLKLAIRIRTMAANSSNGDHQTPTKSPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVVDNYFTGSKDNLKKWIGHPRFELKRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQSPGTQTRSFCYVSDLVDGLIRLMEGDHTGPINLGNPGEFTMTELAETVKELINPKVEIKTVENTPDDPRQRKPDITQAKELLGWEPKVKLRDGLPLMEEDFRLRLGVDKN 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g0187 410 CDD UGD_SDR_e 98 402 - -
Alju10g0187 410 Pfam GDP-mannose 4,6 dehydratase 101 395 IPR016040 -
Alju10g0187 410 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 93 402 IPR036291 -
Alju10g0187 410 Gene3D - 97 404 - -
Alju10g0187 410 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 72 406 IPR044516 GO:0042732|GO:0048040|GO:0070403
Alju10g0187 410 FunFam UDP-glucuronic acid decarboxylase 6 97 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g0187 Alju-ChrAlju10 1392921 1398095 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g0187 49 394 Miscellaneous Gene Families AT1G02000 24.352 3.78e-17 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0117 02 985734 988736 Alju10g0187 10 1392921 1398095 CCT