Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g0117 ATGGCAACAAATTCTTCTAATGGAGAGCACCGAACGACAACGACGACAACACAGGCAACAAAGCCACCTCCCTTGCCTTCTCCCTTGCGCTTTTCCAAGTTCTTTCAGCCCAACATGAGAATTCTGGTTACTGGTGGAGCTGGATTCATTGGCTCTCACTTAGTTGACAGATTAATGCAGAATGAGAAAAATGAGGTTGTTGTTGCTGACAACTTCTTCACTGGATCCAAGGATAACCTTAGAAAATGGATCGGTCATCCTAGATTTGAGTTGATTCGCCATGATGTGACAGAGCAATTGTTCATTGAGGTTGATCAGATCTACCATCTTGCTTGTCCTGCTTCACCGATTTTCTACAAATATAATCCCGTGAAGACTATCAAGACAAATGTGATAGGAACACTGAACATGCTTGGGCTGGCAAAAAGAGTGGGAGCAAGGATTTTGTTGACATCTACTTCAGAAGTATATGGGGATCCTCTTGTGCATCCACAACCAGAAAGTTATTGGGGAAATGTGAACCCTATTGGAGTTCGGAGTTGCTATGATGAGGGAAAGCGTGTGGCAGAAACATTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGCATTGCCAGAATCTTCAACACATATGGACCACGCATGAATATTGATGATGGGCGAGTTGTGAGCAATTTTATTGCTCAAGCACTTCGTGGGGAGCCCCTGACTGTACAAGTTCCTGGAACACAAACTCGTAGCTTCTGCTATGTCTCTGATATGGTTGATGGCCTTATCCGTCTAATGGAAGGAGAAAACACCGGTCCAATCAACATTGGGAATCCAGGTGAATTTACAATGACTGAACTTGCTGAGACAGTGAAGGAGCTTATCAATCCAAGTGTCGAGATAAAGATGGTGGAGAACACTCCTGATGATCCTCGACAGAGAAAACCAGACATAACAAAGGCGAAGGAATTGTTAGGGTGGGAGCCAAAGTTCAAGCTGAGAGATGGTCTTCCTCTCATGGAAGAGGATTTCCGTCTCAGGCTTGGAGTTGCCAAAAAGAATTAA 1059 0.4381 MATNSSNGEHRTTTTTTQATKPPPLPSPLRFSKFFQPNMRILVTGGAGFIGSHLVDRLMQNEKNEVVVADNFFTGSKDNLRKWIGHPRFELIRHDVTEQLFIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQVPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAETVKELINPSVEIKMVENTPDDPRQRKPDITKAKELLGWEPKFKLRDGLPLMEEDFRLRLGVAKKN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g0117 352 CDD UGD_SDR_e 39 343 - -
Alju02g0117 352 MobiDBLite consensus disorder prediction 1 20 - -
Alju02g0117 352 Gene3D - 38 345 - -
Alju02g0117 352 MobiDBLite consensus disorder prediction 1 27 - -
Alju02g0117 352 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 23 347 IPR044516 GO:0042732|GO:0048040|GO:0070403
Alju02g0117 352 FunFam UDP-glucuronic acid decarboxylase 6 38 347 - -
Alju02g0117 352 Pfam GDP-mannose 4,6 dehydratase 42 336 IPR016040 -
Alju02g0117 352 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 34 343 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g0117 Alju-ChrAlju02 985734 988736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g0117 39 351 Miscellaneous Gene Families AT1G02000 24.425 2.31e-16 78.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g0117 02 985734 988736 Alju10g0187 10 1392921 1398095 CCT
Alju02g0117 02 985734 988736 Alju02g0117 02 985734 988736 ECH