Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2498 ATGTACGCGGTGCCACAACACATTCAAACCAGAGTGGTGCGTCAGAGGGGGGCGGTTGGCACGCTGTCCGCGTGGGCAGCGCAGGGCAATCATCCCGTTTTTCATTTCTATAAGAAAGCTTACATACCTTCCCTCTTATTTCCACCACCACTCTACTCTATACATACAAGATACTCCTTCTCTTTGTCCGTCCAGGTCCACCTTCACTCCATCCTCCCTCCCTCCGCCGGCCTTATGGACCTTCGCCGGCGACCTCTTTCCTCCCACAAACTTCCCCATTCTGACCCCCATAAGCCTCCTTCCGATTCCCCCGCCTTCCCTTTTGCGCCCCTCTACCTCACCAATGCTCTATTCTTCTCCCTTTTCTTCTCCGTCTCATATTTTCTCCTTCACCGCTGGCGCGATAAAATCCGCACCTCCACTCCCCTTCACGTCGTTACCCTCTCTGAGATTGCTGCCATTCTCTCCTTCCTTGCCTCCGTCGTCTACCTTCTTGGTTTCTTTGGCATTGGCTTTCTCCACCCTCTTTCTTCTCGTTCCTCCTCCGATGACGACCTCGATTTGGACGACGAATTTGCTATCATTTCCAAGGACGATAGCCGCAATCTTGGCTCTTGCCCATCCGCCCTACTCGATTGCTCCGTCGCACACGATATGCCTGTTCCTCCCAAAAGCTTCGACGACACGTCCCTTCCTCTCTCTCGTGTCGACGACGACATTGTCCGCTCCGTAGTCTCGGGCTCCATTCCATCCTACTCGCTCGAATCGAAGCTGAATGATTGTCGTCGGGCGGTGGCCATTCGGAGAGAGGTGGTGCAGAGAATTACGGGCAGGTCCCTCAGTGGTTTGCCAGCCGAAGGTTTCGATTATGACTCTATACTGGGACAGTGTTGTGAGATGCCTATTGGGCATGTGCAGATCCCCGTGGGAGTGGCGGGTCCGTTGTTGCTTGATGGTGTTGAGTACACGGTGCCTATGGCCACCACGGAGGGTTGTCTTGTCGCCAGCACCAATAGAGGTTGTAAGGCCATTTATGTTTCTGGCGGAGCTTCTTCTACTTTGCTTGGGGATGGGATGACTAGAGCTCCCGTAGTGAGGTTCTCCACCGTCAAGAGAGCCGCTAAATTAAAGTTCTTCTTGGAGGATCCTCTCAATTTTGACTCGCTTGCCGTCGTTTTCAACCAGTCAAGCAGATTTGCCAGGTTACAGAGTGTTCAGTGTGCAATGGCAGGCAAGAATGTGTACATCAGATTCCGATGCAGCACTGGGGACGCCATGGGGATGAACATGGTATCCAAAGGCGTCCAGCACGTCCTTGATTATCTCCGGGAAGGCTTCCCAGACATGGATGTTATTGGCGTTTCTGGAAATTATTGCTCAGACAAGAAAGCAGCTGCTGTAAACTGGATTGAAGGGCGTGGCAAATCTGTGGTCTGTGAAGCCATAATCAAGGAAGAGGTGGTAAAAAAAGTTTTGAAGACTAGCGTGGGGTCGCTCGTGGAGCTTAATATGCTCAAAAACCTTACTGGATCTGCAGTGGCTGGTGCTCTCGGCGGGTTCAATGCCCATGCAAGCAATATTGTTTCCGCTATCTACATAGCCACTGGTCAGGACCCCGCCCAAAATGTGGAGAGTTCTCACTGCATCACCATGATGGAAGCTGTGAATGACGGCAAGGACCTTCACATATCTGTCACCATGCCTTCCATCGAGGTGGGTACAGTCGGAGGTGGTACCCAACTCGCATCCCAGTCAGCTTGTCTTAATTTACTTGGTGTAAAGGGAGCCAGTAAAGAGTCTCCTGGCGCAAATTCTAGGCTTCTAGCCACCATAGTAGCCGGTTCAGTTCTTGCTGGGGAGCTTTCACTCTTGTCTGCCATTGCAGCGGGGCAACTTGTTCGAAGCCACATGAAATACAACAGATCAAGCAAGGATGTGTCCAAAGTTGTCTCCTGA 1956 0.5189 MYAVPQHIQTRVVRQRGAVGTLSAWAAQGNHPVFHFYKKAYIPSLLFPPPLYSIHTRYSFSLSVQVHLHSILPPSAGLMDLRRRPLSSHKLPHSDPHKPPSDSPAFPFAPLYLTNALFFSLFFSVSYFLLHRWRDKIRTSTPLHVVTLSEIAAILSFLASVVYLLGFFGIGFLHPLSSRSSSDDDLDLDDEFAIISKDDSRNLGSCPSALLDCSVAHDMPVPPKSFDDTSLPLSRVDDDIVRSVVSGSIPSYSLESKLNDCRRAVAIRREVVQRITGRSLSGLPAEGFDYDSILGQCCEMPIGHVQIPVGVAGPLLLDGVEYTVPMATTEGCLVASTNRGCKAIYVSGGASSTLLGDGMTRAPVVRFSTVKRAAKLKFFLEDPLNFDSLAVVFNQSSRFARLQSVQCAMAGKNVYIRFRCSTGDAMGMNMVSKGVQHVLDYLREGFPDMDVIGVSGNYCSDKKAAAVNWIEGRGKSVVCEAIIKEEVVKKVLKTSVGSLVELNMLKNLTGSAVAGALGGFNAHASNIVSAIYIATGQDPAQNVESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGANSRLLATIVAGSVLAGELSLLSAIAAGQLVRSHMKYNRSSKDVSKVVS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2498 651 Gene3D - 308 628 IPR023074 GO:0004420
Alju09g2498 651 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 237 641 IPR002202 GO:0004420|GO:0015936
Alju09g2498 651 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 233 630 IPR009029 GO:0015936|GO:0016616
Alju09g2498 651 CDD HMG-CoA_reductase_classI 238 641 IPR004554 GO:0004420|GO:0005515|GO:0008299
Alju09g2498 651 Pfam Hydroxymethylglutaryl-coenzyme A reductase 264 641 IPR002202 GO:0004420|GO:0015936
Alju09g2498 651 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 233 307 - -
Alju09g2498 651 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 415 433 IPR002202 GO:0004420|GO:0015936
Alju09g2498 651 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 455 480 IPR002202 GO:0004420|GO:0015936
Alju09g2498 651 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 506 532 IPR002202 GO:0004420|GO:0015936
Alju09g2498 651 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 324 344 IPR002202 GO:0004420|GO:0015936
Alju09g2498 651 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 560 581 IPR002202 GO:0004420|GO:0015936
Alju09g2498 651 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 297 318 IPR002202 GO:0004420|GO:0015936
Alju09g2498 651 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 626 639 IPR023076 GO:0004420
Alju09g2498 651 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 460 636 - -
Alju09g2498 651 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 100 645 IPR002202 GO:0004420|GO:0015936
Alju09g2498 651 Gene3D - 358 474 IPR009023 -
Alju09g2498 651 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 358 474 IPR009023 -
Alju09g2498 651 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 572 579 IPR023076 GO:0004420
Alju09g2498 651 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 358 474 - -
Alju09g2498 651 NCBIfam hydroxymethylglutaryl-CoA reductase (NADPH) 238 641 IPR004554 GO:0004420|GO:0005515|GO:0008299
Alju09g2498 651 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 417 431 IPR023076 GO:0004420
Alju09g2498 651 Gene3D - 234 307 IPR023282 GO:0004420
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2498 Alju-ChrAlju09 47795758 47800542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2498 79 647 Lipid Metabolism Gene Families AT1G76490 69.257 0.0 821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g0060 07 625110 628609 Alju09g2498 09 47795758 47800542 ECH
Alju09g2498 09 47795758 47800542 Alju09g2498 09 47795758 47800542 ECH