Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0060 ATGCATGCCCGAAAGACCAAAGTTGGCGCTGTAAAGGCCCATACGTGTAAGCACGAAACCCGTGTTCTCACACGTGTCATCATCCTCTATAACATCGCCCTTTCATTTCTCCAATTTCTTCGCTGTCCTTCAAACGTTTTTCCCGCATACTTCTCTCTTAACTTTCCCTCTTCGGTGGAATCCGCCATGGATCCACATCGTCGCCGCCGCCCCCCTCTGGCCACCCCTCACGAAGGCGCCGCCGCTTCTTCTCCAAAACTCCTAAAGAAGCCTTCCTCCGCCGTCGCCAACGGCCGCCATCGAACCGCATCTCCGACTCCTAAAGCTTCCGATGCCCTACCTCTGCCGCTGTACCTTACCAATGCTGTTTTCTTCACGCTCTTCTTCTCCGTTGCGTACTATCTCCTCCACCGCTGGCGTGACAAGATCCGGAACTCTACCCCTCTTCACGTTGTTACCTTGTCTGAGATTGCCGCCATTGTGTCCCTCATCGCGTCTTTTATTTACCTTCTCGGGTTTTTCGGCATTGACTTCGTACAGTCTTTCATCGCGCGTGCTTCTCACGATGTCTGGGACCTCGAGGACGACGCCGGCGAGGCTGATTCTGTTGCTGAGTCTCGCTCTCACAACCATCTCCCCCGCCGTGATTTCGTCATCGAGCAACCGGTTCCTAGATTGATGGTGGATCCCGATCCCTTAGTTTCGTCTCTTTCCTCTGAGGAGGATGAGAAGATCGTGCAGTCTGTGGTGGATGGTACGATTCCATCGTACTCACTCGAGTCCAAGCTCGGAGACTGTAAGCGGGCGGCGGCCATTCGACGTGATGCCTTGCAGAGGATGTCTGGGAGATCTCTTCAAGGATTACCGTTGGATGGGTTTGATTACGATTCAATTTTGGGGCAGTGCTGCGAAATGCCGGTAGGTTACGTACAAATTCCGGTGGGAGTAGCTGGCCCGTTGTTGCTGGATGGGTTTGAGTATACTATACCAATGGCAACCACTGAGGGGTGCTTGGTGGCGAGCACGAACAGAGGCTGTAAAGCTATTTATGCCTCCGGCGGAGCTACCAGCGTAGTGCTGAGGGATGGGATGACCAGAGCGCCTGTTGTAAGGTTCGCTACGGCCAAAAGGGCTGCGGAGTTGAAGTTCTATCTGGAGGATCCTCTCAATTTTGATACCTTGGCTGTCGTTTTCAATAGGTCAAGTAGATTTGCTAGGCTTCAAAGTATTCATTGTTCTATAGCCGGAAAGAACCTTTACATGAGATTCAGCTGTAGCACAGGTGACGCCATGGGGATGAACATGGTTTCCAAGGGCGTGCAGAATGTTCTTGATTTCCTTCAAAATGATTTCCCGGACATGGATGTTATTGGCATCTCTGGGAATTATTGTTCAGACAAGAAGCCTGCTGCTGTAAATTGGATTGAGGGGCGCGGGAAGTCAGTTGTGTGTGAAGCAATTATTAAAGAAGAGGTGGTTAAGAAGGTACTGAAGACCAACGTGGCTGCCTTAGTGGAACTTAACATGCTTAAAAACCTTGCTGGTTCTGCTGTTGCTGGGGCTCTTGGTGGATATAATGCTCATGCCAGCAATATTGTCTCTGCCATTTTTATAGCCACTGGTCAAGATCCAGCACAAAATGTTGAGAGCTCTCATTGCATAACCATGATGGAAGCCGTCAATGATGGGAGAGACCTTCATGTCTCAGTGTCCATGCCTTCCATTGAGGTGGGTACAGTTGGAGGTGGAACTCAGCTAGCATCTCAGTCTGCTTGCTTGAATTTATTGGGTGTGAAGGGCGCGAGCAAGGAGTCCCCAGGATCTAACGCTAGACTCTTGGCCGCCATTGTTGCTGGTTCAGTTTTGGCAGGAGAGCTGTCTCTGATGTCTGCCATTGCTGCAGGTCAGCTTGTAAGGAGTCACATGAAGTACAATAGATCAAGCAAGGATGTCTGTAACCTGGCAAATTGA 1971 0.5058 MHARKTKVGAVKAHTCKHETRVLTRVIILYNIALSFLQFLRCPSNVFPAYFSLNFPSSVESAMDPHRRRRPPLATPHEGAAASSPKLLKKPSSAVANGRHRTASPTPKASDALPLPLYLTNAVFFTLFFSVAYYLLHRWRDKIRNSTPLHVVTLSEIAAIVSLIASFIYLLGFFGIDFVQSFIARASHDVWDLEDDAGEADSVAESRSHNHLPRRDFVIEQPVPRLMVDPDPLVSSLSSEEDEKIVQSVVDGTIPSYSLESKLGDCKRAAAIRRDALQRMSGRSLQGLPLDGFDYDSILGQCCEMPVGYVQIPVGVAGPLLLDGFEYTIPMATTEGCLVASTNRGCKAIYASGGATSVVLRDGMTRAPVVRFATAKRAAELKFYLEDPLNFDTLAVVFNRSSRFARLQSIHCSIAGKNLYMRFSCSTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNYCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKKVLKTNVAALVELNMLKNLAGSAVAGALGGYNAHASNIVSAIFIATGQDPAQNVESSHCITMMEAVNDGRDLHVSVSMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNARLLAAIVAGSVLAGELSLMSAIAAGQLVRSHMKYNRSSKDVCNLAN 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0060 656 NCBIfam hydroxymethylglutaryl-CoA reductase (NADPH) 242 646 IPR004554 GO:0004420|GO:0005515|GO:0008299
Alju07g0060 656 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 577 584 IPR023076 GO:0004420
Alju07g0060 656 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 86 650 IPR002202 GO:0004420|GO:0015936
Alju07g0060 656 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 242 646 IPR002202 GO:0004420|GO:0015936
Alju07g0060 656 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 422 436 IPR023076 GO:0004420
Alju07g0060 656 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 329 349 IPR002202 GO:0004420|GO:0015936
Alju07g0060 656 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 420 438 IPR002202 GO:0004420|GO:0015936
Alju07g0060 656 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 302 323 IPR002202 GO:0004420|GO:0015936
Alju07g0060 656 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 565 586 IPR002202 GO:0004420|GO:0015936
Alju07g0060 656 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 511 537 IPR002202 GO:0004420|GO:0015936
Alju07g0060 656 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 460 485 IPR002202 GO:0004420|GO:0015936
Alju07g0060 656 MobiDBLite consensus disorder prediction 61 108 - -
Alju07g0060 656 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 238 312 - -
Alju07g0060 656 CDD HMG-CoA_reductase_classI 243 646 IPR004554 GO:0004420|GO:0005515|GO:0008299
Alju07g0060 656 Gene3D - 233 312 IPR023282 GO:0004420
Alju07g0060 656 Pfam Hydroxymethylglutaryl-coenzyme A reductase 270 646 IPR002202 GO:0004420|GO:0015936
Alju07g0060 656 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 468 641 - -
Alju07g0060 656 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 363 479 - -
Alju07g0060 656 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 631 644 IPR023076 GO:0004420
Alju07g0060 656 Gene3D - 363 479 IPR009023 -
Alju07g0060 656 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 363 479 IPR009023 -
Alju07g0060 656 Gene3D - 313 641 IPR023074 GO:0004420
Alju07g0060 656 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 238 635 IPR009029 GO:0015936|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0060 Alju-ChrAlju07 625110 628609 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0060 48 651 Lipid Metabolism Gene Families AT1G76490 73.355 0.0 914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g0060 07 625110 628609 Alju09g2498 09 47795758 47800542 ECH
Alju07g0060 07 625110 628609 Alju07g0060 07 625110 628609 ECH